Gene detail

Detailed information of alvinactis_v1_g2799 in Alvinactis idsseensis sp. Nov. Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
alvinactis_v1_g2799	MUCOSA ASSOCIATED LYMPHOID TISSUE LYMPHOMA TRANSLOCATION PROTEIN 1/PARACASPASE	chr_2	812899	823244	-

Gene Structure

More details in Jbrowse Sequence

CDS

alvinactis_v1_g2799

ATGGCAAGTCATTTCATCGAAGACTTACCTCTAAACATCAGAAACGAACTTGAAGATGCTCTGGACAATCATCCGTCAGTTAACTGGCGTGCTTTAATCCAGCTTATGCCTTCTAACTGGTACCAGAGTAATCATGTCGAAGGTTTTGCAATGGAAACTTTGCAACCGAATGGAAGTCCAACAAGAGCATTATTGAATGACTTGTCATTGAGACATGTAACTGTACAACAGCTTGTAGTTTGGTTAAGACAGTTAACTAAACAAGGACACTATTCTAGATTACAGTCAGTGTTAATGAGGCTGCAAGGAATGAATGAGCATCTCACAATAACCAGACAGCCCGACGATCTTTACAAATacccagcaggcagttctttgtacatcaagtgtgaaggttctccatgtgatgctgtatcttatcagtggtttaaaagaaaagttccactccaagGGAAGACCCAACCATATCTTCACCTACAAAAAGTAACTAAAGAAGATGCAGGGTTTTACATCTGTAGGATGGCCGTTAATGAGCAATGCCTGTTCACTAACTGGGCTAAACTTGAGATAATGGAGTCATCTCCAGAGATGGCCAAACCCATAATCACTACACAACCTGAGTGTTTAGCAAATCAAAGTGTGCTGGGTGGAGTACTCCATCTTTACTGTGATGCAGTGGGTGACCCTGCACCACAATTCCAATGGTACAAAGATGACATACCTATCGTAGGTGCAACTGGTAGAGAGTACAATAAAGCTAATTTATGCCTTGATGATGAAGGAGTCTATCTATGTGTGGCATCCAATAGTGCAGGACATGCTTTCTCTGATCGCACTACTGTAACAGTTGGCAAAAATACAAACAATGACGCACAGAACATATCAAGAGGAAATATTGGAAGAGGTATAGTTTCAGATAAAGTAGCATTATTAATTGGAAATAAGGAATACATGGACCACAGACTAGGTACACTCTATCATCCAACCAACGATGTGTGTGATTTAGCAGGTGCTTTGAGGAGTATTGGATTCAAGGTTGTGTCACTTGTTAACCTCACATTAGCTGAGATGAGATTCGCCGTCCGTCAATTCTATCAGATGTTAGATAAGGATATGTACGCTTTGTTTTACTTCGCTGGTCATGGTTTTGAAGTTGGTAATCAAAGTTATCTTATGCCAGTCGATGCCTCGCGGAGATATTTGCCAGAGGAAAACTTGAGTGCATCCGAAGTTATCAAACCAATGCAAAATACTCAAGCTAAACTGAATATTGTACTTCTAGACAGCTGTAGAACAAGACCAAGTGAAAGTCATGTCAATCCCACAGAAGGGTTAGAAGTGAAAAAGAAAAATGTTATCATCGTGTTTCCATGTTGCTCCAAAAATTCTGTGTTCGAGTCCGAATCCCAGACGAATGGATATTTCGCCATCTATCTGTTGAAGCATATAGGCGATGAGAAAACTATCTCAGATGTCATCCTGAATGTTAGCGCTGGCATTGACAGGGAAGACATCCGAGACCCTTACACAAGCCAGAAACAGATCGTCTACACACATTCAACAATGACTGAACAATTGTCGCTGCGAGCACCTGTCGATCATGATGCTCTGTCTATGAAAACTACTGAAGGCTGGAAGGCTGCCCATGAAATCCCAGAAACTCCAGTTCCTGTTTTCAGAGATGGCGACTGCGTTGTTGAGCTTCTTTTCTTCGCCGAGTTTTCCAATGTTTTACTTGTTCACGCAAGGCTCCAGGGGGGAGATGATTCAGCTGTTACCTTCATCTTAGAACCTGGTATTTACAAGGCTGGGGAGGAACGCAATGGATGTGTCTTCGAGAGAGTCAATGAGAAAGACCCAACATTTCCTGTTCGTTTCCCACGTTCCAACTGCCTTACTCAAGCAATTCGAGTAAAAAACCTTCAACGACTTCAGGGTGACCTGATGTTATCTGTTGAGGTCAATTTAGCCAGCGAAACTTGTACAAGATTAGTTCATTACAGAATGGAGGCCAAACCACTGTATGCAAAGATTATATAA

Transcript

alvinactis_v1_g2799

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00656	Peptidase_C14	Caspase domain	Domain	Interproscan
PF13895	Ig_2	Immunoglobulin domain	Domain	Interproscan
PF13927	Ig_3	Immunoglobulin domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001309	Domain	Peptidase C14, p20 domain	Interproscan
IPR003598	Domain	Immunoglobulin subtype 2	Interproscan
IPR003599	Domain	Immunoglobulin subtype	Interproscan
IPR007110	Domain	Immunoglobulin-like domain	Interproscan
IPR011029	Homologous_superfamily	Death-like domain superfamily	Interproscan
IPR011600	Domain	Peptidase C14, caspase domain	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR029030	Homologous_superfamily	Caspase-like domain superfamily	Interproscan
IPR033540	Homologous_superfamily	MALT1, immunoglobulin-like domain superfamily	Interproscan
IPR036179	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR052039	Family	Caspase-related proteases and regulators	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22576	MUCOSA ASSOCIATED LYMPHOID TISSUE LYMPHOMA TRANSLOCATION PROTEIN 1/PARACASPASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004197	Molecular Function	cysteine-type endopeptidase activity	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-