Gene detail

Detailed information of alvinactis_v1_g27915 in Alvinactis idsseensis sp. Nov. Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
alvinactis_v1_g27915	DUF3504 DOMAIN-CONTAINING PROTEIN	chr_15	3538837	3549025	-

Gene Structure

More details in Jbrowse Sequence

CDS

alvinactis_v1_g27915

ATGCTCTTAGAAGCACTGCAGAAAAAATGTTCCTGCAAAGAGATCGACTCCACTCTTATGTCACTCGAAGATTGTGAGGCAGCTAATGAAAAAGAATTGGAAAATAGATGCATTTTTTCTTCTCTTCCATATGCATTTGGGGAGAAGAAATCTCCAAAACAAGATCCTGGAGAATTGTTTTGGGAAATTGTTTCAAGTGATGATGATGTTGAAACCATAGTAGAAAGGAGCACCACCCCAAAATTGATTTCAACTGGTTCTTTGGAAGATATCCAGTCATTATCCCTTATTGCAGAGGGAATGCTCCAGTTTATAAGCCATGGCTCGAGTGGGAAAAAGCTGGTGATAGCACCCGAAAACGCTACACAAGACGTGCCGCGGATATCAATTATTGCAGCAATACTACAGACCATCAGCCCTACAGACGCATCATTACTATGGCAGGCCATCGCATCGTCTGCTGCCACGAACAAGGCCCTCGGAGTAGATGATCTCTCGGAGACCTCAAATATCTACCTCCTGGCtctctctctgaggcgtacagccatgctgacagctgggaaacgaggaggcaagtactatatcccattcggtcaaaaacacttgaaactctcgtcaggccagcttatcgaggtgccaaacgtgatacgcaccatgatacctcagcgtagtgagcgccagtacacacagtactgtgaggaaacagaagtcaagccattcagcgaacgtaaaatgctgcggattttagcagaatgcaaggcctcagtgcgcaagtcactacaGCGCATTGAGAAGCAGTCAATGAGGTTTCGCCGTGCGATATCTGTAGAGAAACGCGTAATGGTCGCACTTTGGAGATTGGCAACTGGAATTGAGCTTAGAAGCTTGAGCGTTCTTTTTGGCATTGAGAGGTCAACAGCCATTCAGATTTTCCATTTCGTCATAGAAGCTATCAACGAGGAAATTGGGCCAAAGTATCTCCAATTCCCATCGGGAGAAGATTTACGACGAGTCGTCAGTGGATTTCGGCGGAGATGGGGGTTTCCACAATCCATTGATGGAACTCACAAAGCCATTACTTCACCCAAAGTACTCCAAAGTGATTATGTAAACCGGAAACGTTATCATTCTGTTACACTTCAGGCTGATCTGCAGTACACGAAATTTGTTGTCAAATGGAGAGGAAAAACAATCCAAATACATGCTAAAATCGCCACTGAAGCTGCAAAGTTATTTGGTATGCATCTGTGCCACTCTGGAAAACTGAATACCTTTCACTCTGGGGCAGCAGCTGAAATTATTTCTGTTAAGAGCGACAGTGTACAGGTAGACTTTCGAGCCTGGTACACATGGAGCGATAACGTTAGATTTCAAATTGTTTTGGAATCCTGTTTTGTCAAAAGGGGGCATGAATTATCAGGATATTCATTGTTAGACATCTTGAAAAATGTATTTGGGTACAATTCATTCCGTAATGGCCAAAAAGAAATAATATCAAGCATACTGGAAGGGAAAGATGGAGTGATGGTTATGCCAACAGGGGGAGGAAAGACTTTATGCTTTGCAATCCCAGCAGTACTATCCAAAGGAGTGACTGTTATAGTGACACCTTTGCTTGCATTAATGGACGACCAGGTTCAAAGGCTAAGAAGGCGTGGTCTCAATGTTTGCTATTTGAATTCAAAAATGTCCAATGACGAAAAAGAAGTTGTGCTTCACTGTCTGTCTGATAAAGACTGTCCATACCAGTTTTTCTTCACTATTCCAGAAGCATTGATTATCCCACATATAAAGGAACTGATAAAAAAGATGAAGAAAAACAATTCTTTGACTAGGTTAATTGTTGATGAAGCACACTGTGTTGACATATGGGGCAATGACTTTCGACCAAGCTATTCGGAATTgtttgctcaactagctgatgaagatataaatcaaattatagcagatgcacaacctgaaagaactcgtcgtcaaactcgttggggagtttctgtgatgaaagaatggttgcagaggagatatcaatctgaagtattggaagatctatcaaaagatatcttagctGACAGATTGAAAAAATTATACCAAGAATTGAAGTTGAACCAAGATAAAGACTACAGTCGTTCTGCCCATCTTTGTATCAGAGCAGCTATCAACCGCCATTTAACTTCTGAACAAGTTGGAAATACATTTTCTATAATAAGTGATCCCGTTTTTAAAGTTGCCAACAGCTCACTCAACGCTAAACTGAAGAGAATCAAAGAACAAGGTCAAAGCAAAGTACAACACCATCCATATATTCAACCAGAAGACATCAAGAAATGTTATGAAAGCAGAATCTTCAGTGGAGATACACCCCTCTCACTTTTACGGGTGAATtggtttaatataagcctgttcttttgtcgacgaggaagagaaaatcaaagacagttgaagaaaaccagctttgtcatccaaaaagacgcaaacagcattgaatatgttaaaatgagcgaaggagagaaaaccaaaaaccatcctggcgATCTCAGCGATAAAGCTGATGAAGGAGACGCCAAAATGTTTTCCACCGGTGAAAAAGATTGTCCAGTTGACTATCTAAAGCAATTACTGTCTGTCCTTAATCCAGAAGAAGAAGCGCTATTCCAACGACCAAAGAGAAATTTCATTCCTACCGACAAAgttcccggtccggttccggttccgttgggctccgtttccgTGGAGGCGCCTGGGGACGAGACAGGGCTTTGA

Transcript

alvinactis_v1_g27915

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00270	DEAD	DEAD/DEAH box helicase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011545	Domain	DEAD/DEAH box helicase domain	Interproscan
IPR014001	Domain	Helicase superfamily 1/2, ATP-binding domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR052787	Family	Mitochondrial antiviral-signaling domain-containing protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21446	DUF3504 DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-