Gene detail

Detailed information of alvinactis_v1_g26223 in Alvinactis idsseensis sp. Nov. Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
alvinactis_v1_g26223	ACROSIN-RELATED	chr_14	2616680	2630138	-

Gene Structure

More details in Jbrowse Sequence

CDS

alvinactis_v1_g26223

ATGAGCGCTTCAACGGACAACTTTACAGCTGTAAATGAAAGCGTTTCGTGTTGGAAGTTGTGTGTGTGTGGATTCAATGGTTTTAGACAACTATCAAGCAATGTAATAGAGAATGGAGATATTATTGATGAACCGATAGAGATGGTCAACGCTGGAGATAACATTACTAAAGTCGAATCATCTTTGACCAGTACCTTTATACTATGGAAAGATGGTAAAATAAGTGTTACTGGATGGATTCcaggaactacaaatacaggaactacaaatGACTTGCTTTCTGGTCAAGTCGTCCAGGACATTGCTTGTATCAATGATAATCTCATGCTTGTCACTAAAGCAGGAAAACTGCTGTCATGGAATGATTACACACATAAAGACTCACGTCCAGATAAAGTAGAGACTTGTCAGTTGGTTTCTCAAGTGAGGTGTGGAGACTTACACTTCATTATTACTATGGATAATGGTTGTATTGGGGAAGTTGTTCCAACTTCAAGCAAAGAAGAACCTGAAAGTAAAGAATCAAGTTTAATGGTGAATGAAATCAACTTTGTTCATGAAGTTCAGTCTGTTGATTGTGGAAAAGAGCATGTTTTACTCTTGACAACAACTGCAAAAGTCTTCAGTTTTGGAGGAGGAAGCCGAGGACAGCAAGGGAATGGATGTCTTGAAGCACAGATCACTCCACAGCTTGTAGAGGCTTTGGATGGCATAGAAATCACtcaaatcacttgtggtggatggcattcagcagtaataagcaACTCTGGTGATGTTTATTGCTGGGGATGGAACAAAGATGGGCAGGTGGGTGTCACAGACACTGAAGGCTCTCAGTCTGTACAAATCCAAGCCGTTCCATTTCCTCTGACTTTCAGTGACAACAGTGATGTCATAGTTGTCAGTGTAAGCTGTGGTTCAAGACATACTGCAGTGGTCACATCTTGTGATGAAGTCTGGACATGGGGCTGGGGTTTTTATGGTCAGCTTGGTCATGGAAGTAGAAATACCTGCCACCAACCAACCAAAGTTCTATCCATTCAATCACAGGCGTCTGCGCAGCACAATGGCCCACTAAGCCACCGAACAATTGGAGCACTAGTccttggagaccatggaccaccagaccttggcgaccatggaccactagaccttggagaccatggaccactagtccttggagaccatggaccactagaccttggagaccatggaccactagtccttggaaaccatggaccactagaccttggagaccatggaccaccagaccttggagaccatggaccaccagaccttggagaccatggaccaccagaccttggagaccatggaccactagaccttggagaccatggaccaccagaccttggagaccatggaccaccagaccttggagaccatggaccaccagaccttggagaccatggaccactagaccttggagaccatggaccactagaccttggaaaccatggaccaccagaccttggagaccatggaccaccagaccttggagaccatggaccaccagaccttggagaccatggaccactagaccttggagaccatggaccaccagaccttggagaccatggaccactagaccttggagaccatggaccaccagaccttggagaccatggaccactagaccttggagaccacggaccaccagacattggTCATGTACCACTAAACCACCTAGGCCCACTACACCGTGGAGACCATGGACCACTAGACCACCATCAAGACCAGGAAGGTAACCAAGGAAACCAGTGGATCAAAGCAACTTTCCCAGTCTATACCTCTGGTCTTTCTAGGTTGGACTTCGATGCGATTATTGGTCCATCGTTCACGTCAGACATCGCACTTGATGACCTTGGTTATCAGGAGTACCGTTACTTATCCAGTTGTACAGTAACACCAAGCTGTGCTAAGCCGGGCAATCAACCAACACCTTACCCTACCATCCCACCCATGACCTATCCACCTTTTAACGTAACATCAGCTCCTCTTCCTTCTAATGTTAGTTGTGGTCGTCCTGCCATCGCTCATTCACGTGTAATCGGTGGTAAGGATGCTCGTCCAGGTTCCTGGCCATGGCAAGTTAGTCTGCATACTTATGGCATGTTTGTTTGTGGTGGCTCTTTGATTTCACCTCGTTGGGTCGTGACTGCAGCTCACTGTATCTTTCCAGGCGCCAGATACGACGTCGTTGTTGGTGACCATAACCGTACCGTCCATGAAGGATTCGAACAAAGAGTCTCCGCCTCGCAAATCTTTGTTCATCCAAACTGGAATCGCAGTAACATCGACTCTGATATCGCACTCGTTCACTTGTCTCGTCCTGTGTTCATCAACTATCGAGTTCGACCTGTTTGTTTACCACAACAAGACGAATATGTACCATCTGGTAGCAAATGCTATATCACAGGATGGGGAAAGATTCGTCACCCCGGCGGTTCCCATGACGTATTGCAGCAAGCGGTTCTACCAGTCGTTAGTAAACAACGTTGTCAACAAAAACTGTCGAACAGCACAGGAATGGGTTCAAGATTGAGAATCACTGACAAcatgatctgtggtggcgaagagggctccatcaaaagtggttgccatggtgatagtggtggtccttttgtgtgtcaagcccgagatggacgatgggtactccagggagcggtcagctggggatcgtctcgttgcgatgctaaacaacgctacaccgtgttttcacgagttggacgattcaggaattggatcGATAATCACATGAGACGACATGGACGCTAG

Transcript

alvinactis_v1_g26223

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00089	Trypsin	Trypsin	Domain	Interproscan
PF00415	RCC1	Regulator of chromosome condensation (RCC1) repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000408	Repeat	Regulator of chromosome condensation, RCC1	Interproscan
IPR000998	Domain	MAM domain	Interproscan
IPR001254	Domain	Serine proteases, trypsin domain	Interproscan
IPR001314	Family	Peptidase S1A, chymotrypsin family	Interproscan
IPR009003	Homologous_superfamily	Peptidase S1, PA clan	Interproscan
IPR009091	Homologous_superfamily	Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II	Interproscan
IPR018114	Active_site	Serine proteases, trypsin family, histidine active site	Interproscan
IPR033116	Active_site	Serine proteases, trypsin family, serine active site	Interproscan
IPR043504	Homologous_superfamily	Peptidase S1, PA clan, chymotrypsin-like fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24252	ACROSIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004252	Molecular Function	serine-type endopeptidase activity	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-