Detailed information of alvinactis_v1_g24154 in Alvinactis idsseensis sp. Nov. Gene info
Gene IDAnnotationChromosomeStartEndStrand
alvinactis_v1_g24154SYNTAXINchr_13691281704376-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00804SyntaxinSyntaxinDomainInterproscan
PF04135Nop10pNucleolar RNA-binding protein, Nop10p familyFamilyInterproscan
PF05739SNARESNARE domainFamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000727DomainTarget SNARE coiled-coil homology domainInterproscan
IPR006011DomainSyntaxin, N-terminal domainInterproscan
IPR006012Conserved_siteSyntaxin/epimorphin, conserved siteInterproscan
IPR007264FamilyH/ACA ribonucleoprotein complex, subunit Nop10Interproscan
IPR010989Homologous_superfamilySNAREInterproscan
IPR036756Homologous_superfamilyH/ACA ribonucleoprotein complex, subunit Nop10 superfamilyInterproscan
IPR045242FamilySyntaxinInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR19957SYNTAXINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000149Molecular FunctionSNARE bindingInterproscan
GO:0001522Biological Processpseudouridine synthesisInterproscan
GO:0005484Molecular FunctionSNAP receptor activityInterproscan
GO:0006886Biological Processintracellular protein transportInterproscan
GO:0006906Biological Processvesicle fusionInterproscan
GO:0012505Cellular Componentendomembrane systemInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0016021Cellular ComponentmembraneInterproscan
GO:0016192Biological Processvesicle-mediated transportInterproscan
GO:0030515Molecular FunctionsnoRNA bindingInterproscan
GO:0031201Cellular ComponentSNARE complexInterproscan
GO:0042254Biological Processribosome biogenesisInterproscan
GO:0048278Biological Processvesicle dockingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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