Gene detail

Detailed information of alvinactis_v1_g21192 in Alvinactis idsseensis sp. Nov. Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
alvinactis_v1_g21192	CELL DIVISION CONTROL PROTEIN 6-RELATED	chr_11	4809026	4827205	-

Gene Structure

More details in Jbrowse Sequence

CDS

alvinactis_v1_g21192

ATGAGACGACTAATGCTGGTTAATGTTGTGTTCATAGCTGTGTTGAGCGTAGCAAATGCAAGAACATTTCATATGGAGAACTTTATAGAAGACCCAGATGTCCATGGATTCACTTGCAAAGACAAAGAAGACGGCATTTACCAAAATCCTGACGACTGTGCCAGTTTTATTCAATGTGCTAACGGAAGGACATTTCATCAGAAGTGCGCCGAAGGAACAAAGTTTAACGCAAAACTCAAAATCTGTGATTGGCCAGATAATGTGACTTGTCCAGAGTTTTGCGCATCTCGTCCAGATGGCATTTATGCCGATCCTGAGACTTGTAAGGGCTTTATTCATTGCCATAACAACCGGACAGCACGTAAGAAATGCCCTGGTGGCTTACTGTTTAATCCTAAACTAAAGacagacagacggacaggcagacagacagacagacaggcagacaagcaagcaagcagacagacagacagacagatagacagGAAGTGCACAGTACGAGGCATTCCTGTCAAGATCAATGATTACGTCACAGTAAACACAGGCAATTATTCCATTGGCAAAGTGGTTGATCTTCATGACCTTGGAGATTTTCCTGACCGACATCAAGTGAAAATACACTGGCTGTACAGACATGAGGAATTAACCAAAATATGTCGAGATATGCTTGAAAAAAGAACTAACGAACTGTTTGTTCCTGCTAATGATCCAGACAAACGACCAATAATGGGTAGTTTGGAAGTCATGGATGCCGACACTATAATGGACACTTGTGATGTGAAATTTCTGGAAACAAGCCAGGAGTTTCCAACAAGTTGTACAGAAGCCGGCCCTTTTTATGTCCAGTTTGCTTTTGATCTTCACAACAACATCTATTCTGCAGTGGGTTATATGGATGAGTACATATATGCACTGAAGACTGCCGAGGACAAAAATAAATGTATAACTCCAAGGCCTTCAGTCGAAATGAGTACTCCGAAAAGAGAAGAAGAGAGTAGAACCAGGACTGCAAGTACCATACAATGGATTGGAAATAGCACGATAGAGGATGGTAAACTTCATTACTCGAAGTGCACAATACGAGGCATTCCTGTCAAGATCAATGATTACGTCATGGTGAACACAGGCAATGATTCCATTGGCAAAGTGGTTGATCTTCATGACCTTGGAGATTTTCCTGACCGACATCGATTGAAAATACACTGGCTGTATTATTATGATGATTTAACCAAAATATGTCAAGATATGCTTGAAAGAAGAACTAACGAACTGTTTGTTCCTGCTAATGATCCAGACAAACGACCAATAATGGGTAGTTTGGAAGTCATGGATGCCAAGACCATAATGGATACTTGTGAGGTGGAATTTCTGGAAACAGGCCAGGAGTTTCCAACAAGTTGTACAGAAGCCGGCCCTTTTTATGTCCAGTTTGCTTTTGATCTTCACAACAACATTTATTCTGCAGTGGGTTATATGGATGAGTACATATATGCACTGAAGACTGCCAAGGACAAAAATAAATGTAGAACTCCAAGGCCTTCAGAGAAGCAATGGAGAGTTGGAACACCAAAGCAAGTCAATTGTAGTTATAGTCCATTTTCTCTTAAACCCCTGCAAATCATGTTAAAGGCTATAAAACCTGATAAGACGAGTAACAAGACACCGTCAAAAAGAAAAGCCAGTAAAAGTGTACCTGACGAGGGAgaagtggtgtgcaagagaagtaaagtgaagACAAAAACAAAACAGACGCAAGATAGACATCAGAGCAAGGGAACACCAGAGACATTACAGTCTCCCAAAACTCATTTCAAAACTGATGAAGTTATAGAAATGGTTTGGTCTAGTGATGACGAGTCACAGGAAGACGTCGACACTGACGATAATGAAGTCTTTTTTAAAGAGAGAACACCAAGGAGGAAAACCTCCACAAGAACAACAAGAGACCAAAGTAGAGTGACAGAAACACCAACTCCCAAAGACACAGTGCAATCTGGGAAGGATAACAGAAGATCAAGTTCCAGGGTACCCCCCAACGATCTCTCCAAAAATCAATACCAGACCCCTAAAGGTACATCACGGTCAAAATCAACCACAGGTAGACCAACTCCGCTTGCTGCTAAAAATACACCAAAAACTGTGTCTAGCAATaagacaccaatgcaaactacgaagacaccaatacagactactagtagaagtcatactgctaaaactacatctagcaagaagacaccaatacagactactagtagaagtcatactgctaaaactacatctagcaagaagacaccagtgcagaagacaccaatgcaAACTACTAATAGAAGAAAATCATCAACGGTGGCCACAGACATGCTTGCCGGTAACATAACACCAAAGAAAACCCCAAGAAGAACAGGAAGAAAAAGCTTAGCAGAAGGTTTGACACCTAGTATACCTTGTAGATCAGAACCATGTAAGACACCAAGGACGCCATTACAAGAGGCAAGGTCTAGactgcatgtttctgctgtgcctccatcattgccttGCCGGGAAGATGAATTTGCTGACATCCTTGGGTTTGTTGAGGGGAAACTGATTGAAGACAATGGAGGGTGTATGTACATATCTGGAGTGCCAGGAACTGGAAAAACAGCAACAGTACACGAAGTAATACGAGTCCTACAAGAATCCAGTGATGATGATATTCCTGAATTCAAGTTTATTGAAATTAACGGGATGAAATTAACAGAACCCAATCAAGCATATAGCATGCTACTTAAGAAACTGACGGGTCAAAAGGCTACACCTGCGCATGCATCAGATTTACTAGAAAAACTGTTCACGGAAAAAGATGCAAAGAAAGAAAATTTGGTGCTAGTGGTTGATGAACTCGACTTGTTATGGACTCGCAAACAAGGTGTCATGTACAACTTATTTGAATGGCCTTCAAGATGTCACTCAAAACTTATTGTACTAGCCATTGCTAATACTATGGATCTACCAGAGAGAATGATGATTAACAGAGTACAGAGCAGGCtgGGCCTGACAAGAATCACTTTCCAGCCATACACGTTCTCACAACTACAAGAGATTGTTCTATCGCGTATCCAGTACCTAAACGTGTTTGATCCTGATGCTATACAACTTGTAGCAAGAAAGGTAGCCTCCGTGTCTGGTGATGCGCGTCGCTGTCTAGACATATGTCGACGTGCTGTCGAAATCACTGAACAAGAAGACAAGTCAGGATCAAAGCAGGGAAATCTTGTTGGAGTGACTGAAGTCGATGCTGCTTTACAAGACATGTTTTCGTCGCCCAAGATAAAACTTATGATGAATTTATCGTCTTATGAGAGATTGTTACTGAGAGCAGTTCTCACCGAGTTCAAGAGGACTGGGATCGAGGAAACTATGTTTGGTGAGGTTTTTGATGAATTGTGTAATCATTGTCGATTAGAAGGAATCACCACGCCCAGTATGACAGAAGCATCAGCAATTGTGAGCCGAATTGGTGCAAGTAGACTTCTTTTGGTAGAAAGAGGACGCATGGACTTACAGCGAAGAATAAGTTTGAAC

Transcript

alvinactis_v1_g21192

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00004	AAA	ATPase family associated with various cellular activities (AAA)	Domain	Interproscan
PF01607	CBM_14	Chitin binding Peritrophin-A domain	Domain	Interproscan
PF09079	Cdc6_C	CDC6, C terminal winged helix domain	Domain	Interproscan
PF17872	AAA_lid_10	AAA lid domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001025	Domain	Bromo adjacent homology (BAH) domain	Interproscan
IPR002557	Domain	Chitin binding domain	Interproscan
IPR003593	Domain	AAA+ ATPase domain	Interproscan
IPR003959	Domain	ATPase, AAA-type, core	Interproscan
IPR015163	Domain	Cdc6, C-terminal	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR036508	Homologous_superfamily	Chitin binding domain superfamily	Interproscan
IPR041083	Domain	AAA lid domain	Interproscan
IPR043151	Homologous_superfamily	Bromo adjacent homology (BAH) domain superfamily	Interproscan
IPR050311	Family	Origin Recognition Complex 1/Cell Division Control Protein 6	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10763	CELL DIVISION CONTROL PROTEIN 6-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003682	Molecular Function	chromatin binding	Interproscan
GO:0003688	Molecular Function	DNA replication origin binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005576	Cellular Component	extracellular region	Interproscan
GO:0005664	Cellular Component	nuclear origin of replication recognition complex	Interproscan
GO:0006270	Biological Process	DNA replication initiation	Interproscan
GO:0008061	Molecular Function	chitin binding	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0033314	Biological Process	mitotic DNA replication checkpoint signaling	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-