| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| alvinactis_v1_g20231 | MATRIX PROTEIN, PUTATIVE-RELATED | chr_10 | 15377392 | 15394574 | - |
| CDS | |||||
| alvinactis_v1_g20231 | |||||
| Transcript |
| alvinactis_v1_g20231 |
| Protein |
| alvinactis_v1_g20231 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF03160 | Calx-beta | Calx-beta domain | Domain | Interproscan |
| PF16184 | Cadherin_3 | Cadherin-like | Domain | Interproscan |
| PF19309 | Frem_N | Frem protein N-terminal domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR003644 | Domain | Na-Ca exchanger/integrin-beta4 | Interproscan |
| IPR038081 | Homologous_superfamily | CalX-like domain superfamily | Interproscan |
| IPR039005 | Repeat | CSPG repeat | Interproscan |
| IPR045658 | Domain | FRAS1-related extracellular matrix protein, N-terminal domain | Interproscan |
| IPR051561 | Family | FRAS1-related extracellular matrix | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR45739 | MATRIX PROTEIN, PUTATIVE-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0007154 | Biological Process | cell communication | Interproscan |
| GO:0009653 | Biological Process | anatomical structure morphogenesis | Interproscan |
| GO:0016020 | Cellular Component | membrane | Interproscan |
| GO:0062023 | Cellular Component | collagen-containing extracellular matrix | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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