Gene detail

Detailed information of alvinactis_v1_g20167 in Alvinactis idsseensis sp. Nov. Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
alvinactis_v1_g20167	DISULFIDE OXIDOREDUCTASE	chr_10	14579070	14589445	+

Gene Structure

More details in Jbrowse Sequence

CDS

alvinactis_v1_g20167

ATGAAGTTTAAGCTGAGCACAAAGGTTACAGGAGCACGAAGGACAGAAAATGGTGTTGTTGTAAGTGTGGAGTCAGCAAAAGATGGATCTAAGAAAGAAGAGTTGGAATGTGATGTTCTGTTGGTATGCATAGGGAGGAGACCTTATACCACACGACTTGGCTTGGAGAAAATTGGTATACCCCTGGACTCCAGAGGTTGCGTGCAAGTCAACGAGAAATTCCAAACCATCATCCCAAGTGTCCATGCCATTGGTGACTGTATAGATGGACCCATGCTGGCGCACAAGGCTGAAGATGAAGGTATTATATGTATAGAGGGAATGAATGGTGGTGCAGTACATATTGACTACAACTGTGTTCCTAGTGTCATCTACACTCATCCGGAAGTAGCCTGGGTGGGGAAATCAGAAGAAATGCTAAAAGAAGAGGGTGTGGTCTACAAGGTTGGCAAGTTCCCTCTGTCTGCCAATAGCCGAGCTCGAACCAATGCAGACATAGATGGTTTAATCAAGGTCGTGGCTGACAAGGAGACGGACAGATTATTGGGTGTGCACATGGTTGCACCTTATGCAGGAGAGATAATCAACGAAGCTGCCTTGGCTATGGAATATGGTGCATCGTGTGAAGATATTGCACGAGTTTGTCATGCCCATCCGGAAACATTCAGAGTGGATTCTGATCAGGAAGTGTCGTCAAACAGAGCAAGACATCGACAGATTTTCCCAGGCGAGACGGGGACCTTCTGGACCATCATTCGCCACATCTTCTATGCTGTGTCCTTTCTGACCCACACCAGTATTGCTGTAACATTTCTGAGTTTCTTTGTCACAGCACTCAGCTTCAGCGTCAACTGTGCTTTGGAACTAGTACTGGAAATGATAACACCAACAGGAGACTCCACGAGCAGAAGAAACTTCTACGCTGCctgcttgtttgttcttcttctttgctttctattcactagctcctttgtgctttctctgttctGGGAGGTAGTGGTGGTTGTTCTCTTCAAGTCTGCGATGAGATACACCAACATCAAGATTGGCCTCTGTGTTGCAGTTCTTATCTGCGCGGGAAGTTGGTCTGGGGTTACTGAGTCGGCGCAAACTGGTTTCATTTTATTTCTCTCCAAATGCTTGATAGTAGCTTGGGTGATGGCTTTTATTTTGTCTCTCCTGGGATCCCTGTTTCTCTTGTGTTTCGTCTATAAAGCGGCCAGAGGAAGCAAGGAAGAAGCGAACGGATTCGTGATCCAGAAGAAGATATTCTTGCTGATATCCGCTGTATTCTTGGTCATCGTCATCGTGGGCGCAAGCATTACTATTTCATGTGGTGAGGAATGTCAACTCGGTCCACCAACGAAGGGCTCGTCCTATATGCTAGGCTATAACTTGATGAAGGACGCACCTAGAGTCCCTGGTTATCCCATTTGTAACAAAAAGTGGAGTGGACTTCAGTTGGAAATAACCGACATGGCGTTTCTAGCCGACACCGCGTACAAAATCCAAAAACATAACAAGACTAACATTCGTGACATTGTTAATGAATATTTCAGAGATCGTAACATCAATTGGGACGTCGAGTCGGTCAACGCGAAGAAGCCTTTCTTTTTCCACATTCGTAATTCGGCCAAGAAGGTGAACATTTTCAGCATTCGAGGAACTGTTGATTTACGAGACTGGTTTGAGAATGCTAAAATGTGGAACGAAATAGCAGTGTTCCAGTTGATCTCCGTAGCGCTACCCGTACAGCACTTGCCGTTTGAGTTCGTAGCCTTCTTCATATCCAAGTCGGCCTCCATCGATTATCTTCTGCATCAATCTACGTACGGCCATTACTTCAAGCCTCTGGAAGACTACGTGAAAGCAGAGTACAACACTTCCGAGGAATACTTTCTTGTTGGTCATTCCCTCGGTGGTGGGCTGGCGAAGATCATTGGAAGCAGGAATAAGATTCCCGCCATCGCCATCTCCAGTCCAGGCGAGATATACAATCACGTGAAGTTCAACTACACGTTGGAAGACGTTCAGAAATACACAACAACAATACGCGCTCAAAACGATCCTGTCACGTGGATCGACAGGTCTGGAGGCCTGGTGCAGTACGTGGAGTGTGACAACTCCGATTTTATGAAGTGTCACAACATCCGCAATACCTATTGTGAGCTCAAGAAGAAGTGTCACGCAACAACACGAATTCACTGTCCTGGCGATCCCAACTCGTTAGATATGCTGATGGATAAGTTGCGTATCAAGCAGCCAAAAAACGTCTGA

Transcript

alvinactis_v1_g20167

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02852	Pyr_redox_dim	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain	Domain	Interproscan
PF07992	Pyr_redox_2	Pyridine nucleotide-disulphide oxidoreductase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004099	Domain	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain	Interproscan
IPR016156	Homologous_superfamily	FAD/NAD-linked reductase, dimerisation domain superfamily	Interproscan
IPR023753	Domain	FAD/NAD(P)-binding domain	Interproscan
IPR029058	Homologous_superfamily	Alpha/Beta hydrolase fold	Interproscan
IPR036188	Homologous_superfamily	FAD/NAD(P)-binding domain superfamily	Interproscan
IPR050151	Family	Class-I pyridine nucleotide-disulfide oxidoreductase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22912	DISULFIDE OXIDOREDUCTASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004148	Molecular Function	dihydrolipoyl dehydrogenase activity	Interproscan
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan
GO:0045252	Cellular Component	oxoglutarate dehydrogenase complex	Interproscan
GO:0050660	Molecular Function	flavin adenine dinucleotide binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-