Gene detail

Detailed information of alvinactis_v1_g15748 in Alvinactis idsseensis sp. Nov. Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
alvinactis_v1_g15748	SYNAPTOTAGMIN	chr_7	26535219	26555132	+

Gene Structure

More details in Jbrowse Sequence

CDS

alvinactis_v1_g15748

atgattgattggttggttggttggttggttggttggttggttggttggttggttggttggttggttggttggttggttggttggttggttggttggttggttggttggttggttggttggttggttggttggttggttggttggttggttggttggttggttggttggttggttggttggttggttggttggttgcatttggttggttggttggttggttggttgattggttggttggttggttgGTGTGGATGTGCAGTAGACTTACTCATCCATTGTGTACCTAATGCAAGTAgcatgcaaactatgacgcactcggTTGCCTTGGTGGCTGGTTTGGCCACAGGAATCCCGGTCATCTTCCTAGTCTTCATCTACGTCACGTATTGCTGCTGCAAAAGAAAACAAAAGGACGAGCTGCTACAGCAAGAACCACGGCTTTGGAGAAGAGATGTGCGGGCGCGTTCGTCGCACGATCTATTCATCCCCGCCTACGTCCCGCGCTTTGTTCAGAAATTCGTCCAAAATTCGTCCAAACATAGCAGCGAGACGTCCTCGACTCAGACCTCCCCGGTAGATGACAAGACGTTCTTTAGCGAGGGTTCCGAGCCGTACCGAACAGCACCCGATGACATGGGTGGGGCCGTGGACTGGCCTGGGGGCTTGAGTGAGCTTCAGATCCCTGAAGCGCGTCGGTCTTCGTTGCTACAGCCCAGTACCTCCAGCGGCGAGAGTTCCGAGAGCACATACGAGCACACTCCGAAAAAATGCATCGGGCCCAGGTCTCCTCGGTCCGCATCGGCATCTGCATCAGATAGCAAATCTTTTGAATTCGTTCGGCCCATCCCCGTCAAACCGCTCATCACCATCACCCGCGCTGAGTCTCTGTCCAAAGACGACTTGAATGCTCGTCTTGAAAGCACCATGTACACCGCTGACACAGAGAACGTGCGGCAGGCTCATTCCGATTCACACGTAGAGTCATTTAAGAAATCTAGAGATATATCTTCCAAGAGTTTAGAGAGTGTTAACAAAGGGGAGAAGTGCGGTAGTACAGATCGGAATCTTGCCGCGCGATCACGCAGTGCATCCCAGTCTTCTCGCAGTCAAGAGCAAACAAAGGGTGACCAATCCACTAAAATACCAATGAACATTTCGTCACAAGTGATCCGGTCAAGAAGGGGATCAAAAGGCAAAGGAATTCAGCCAAGCAAATCCAATTTAGGGAAAATTAATATATCATTGAAATACAAGCAGACTACATGCGATCTCTTTGTTAAGATAATCCAAGCACGTGACCTCCCCTGCAAAGACCTCCGCCGCAACACGTCATCGCCCTATGTCCGCGTGTATGCCCTGCCCTCTCGACGTCACAACCACCGAACCAACGTCATCACAAACAACCTGAACCCGACATTCAATGAACTGTTTATCATCAGTGGACTCACTCTGATGGAGGTCCAGCAGTTGAGTTTGCAAATCCTTATTATTCATAACGAGGTCATATCAAGGAACGTAGTTATTGGTGAGGTGATGGTAGCTCTACCCAACCTGGATCTTGCTGGTGGCGAGACGCAGTTATGGAGGGATATCAGACCTTATCACTTTCAAAATGTGCTGGGTGAGCTGCACATCTCCGTGTGCCATCAGCCTCTGTCTAGTCGGCTGTCTGTGACAGTACTACAAGCCAGAAATTTACCTAAAATCAGTAACTTAAACATTGGAGATCCTTACGTAAAAATAGAACTATTTTCATCACGGTCACGTGTGTCCAAGAAGAAAACTCGCGTCAAGAAGAAAACAGTAAACCCTAAATTCGCACAAACTTTCACGTTCGACCTCGCTGCGGACTCAGTCCTGGACATGATGACAATGACGTTCACGGTCATGGTCCAAGACTCGAGCGGCTGCCACGAGCGAATCGGACAGTATGACTTGTCAGCTTCGCAGTTTTCTCCTGATGGAAGGGTTTTCCAAGTTGAATACGCGAATAAAGCGGTGGAGAACAGTGGTACTGCAGTAGCTATTCGATGTAAAGATGGTGTCGTCTTTGGTGTTGAGAAGCTTGTTCTCTCTAAGCTGTACGAGTATGGAGCCAATAAGAGAATCTTTCACATTGACACGCACATTGGAATGGCAATTGCAGGTCTGTTAGCAGATGCCAGACAGATTGTATCAACAGCAAGAGAAGAAGCAGCGAACTATAGATCTGTCTACGGCACCCCCATACCACTCAAGTACCTTGTCAATAGAGTGTCTGGATATGTTCATGCCTTCACCTTGTACAGTGCTGTCAGACCCTTTGGTTGCAGTATAATGTTGAGTTCCTTTGGTCCAGATGGCCCTCAACTGTACACCATTGATCCTTCCGGGGTGTCTTATGGATATCATGGCTGTGCTATAGGTAAAGCCAAGCAGTCTGCCAAAACAGAAATTGAAAAGTTGAAGATGCAGGAAATGTCTTGCGAAGATGCTGTGAAAGAAGTTGCTAAAATagatggaagaacgatgaagagatggatagaaagaggaatgacaaaagtgggacaggaaggatggaagagatggaagaatgatgaagagatggatagaaagaggaatgacaaaagtgggacaagggatggaagagatggaagaacgatgaagagatggatagaaagaggaacaacaaaagtgggatggaagagatggaagaacgatgaaaagatggatagaaagaggaacaacaaaagtgggatcgaagggatggaagagatggaagaacgatga

Transcript

alvinactis_v1_g15748

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00168	C2	C2 domain	Domain	Interproscan
PF00227	Proteasome	Proteasome subunit	Domain	Interproscan
PF10584	Proteasome_A_N	Proteasome subunit A N-terminal signature	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000008	Domain	C2 domain	Interproscan
IPR000426	Domain	Proteasome alpha-subunit, N-terminal domain	Interproscan
IPR001353	Family	Proteasome, subunit alpha/beta	Interproscan
IPR001565	Domain	Synaptotagmin	Interproscan
IPR023332	Family	Proteasome alpha-type subunit	Interproscan
IPR029055	Homologous_superfamily	Nucleophile aminohydrolases, N-terminal	Interproscan
IPR035892	Homologous_superfamily	C2 domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10024	SYNAPTOTAGMIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000149	Molecular Function	SNARE binding	Interproscan
GO:0001786	Molecular Function	phosphatidylserine binding	Interproscan
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0005544	Molecular Function	calcium-dependent phospholipid binding	Interproscan
GO:0005839	Cellular Component	proteasome core complex	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0006511	Biological Process	ubiquitin-dependent protein catabolic process	Interproscan
GO:0014059	Biological Process	regulation of dopamine secretion	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0017156	Biological Process	calcium-ion regulated exocytosis	Interproscan
GO:0017158	Biological Process	regulation of calcium ion-dependent exocytosis	Interproscan
GO:0019773	Cellular Component	proteasome core complex, alpha-subunit complex	Interproscan
GO:0030276	Molecular Function	clathrin binding	Interproscan
GO:0051603	Biological Process	proteolysis involved in protein catabolic process	Interproscan
GO:0070382	Cellular Component	exocytic vesicle	Interproscan
GO:0071277	Biological Process	cellular response to calcium ion	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-