Detailed information of alvinactis_v1_g1447 in Alvinactis idsseensis sp. Nov. Gene info
Gene IDAnnotationChromosomeStartEndStrand
alvinactis_v1_g1447CADHERIN-23chr_12436733824390856+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
--

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00028CadherinCadherin domainDomainInterproscan
PF02210Laminin_G_2Laminin G domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000515DomainABC transporter type 1, transmembrane domain MetI-likeInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR001734FamilySodium/solute symporterInterproscan
IPR001791DomainLaminin G domainInterproscan
IPR002126DomainCadherin-likeInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR020894Conserved_siteCadherin conserved siteInterproscan
IPR039808FamilyCadherinInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR24027CADHERIN-23Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0016342Cellular Componentcatenin complexInterproscan
GO:0022857Molecular Functiontransmembrane transporter activityInterproscan
GO:0045296Molecular Functioncadherin bindingInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0098609Biological Processcell-cell adhesionInterproscan
GO:0098742Biological Processcell-cell adhesion via plasma-membrane adhesion moleculesInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
------

TOP