Gene detail

Detailed information of alvinactis_v1_g12929 in Alvinactis idsseensis sp. Nov. Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
alvinactis_v1_g12929	SERINE-THREONINE PROTEIN KINASE	chr_6	14520085	14523869	-

Gene Structure

More details in Jbrowse Sequence

CDS

alvinactis_v1_g12929

ATGAGCGGAAATCAGCTCCCGGTAGCAGTGAAGGAGTTCGTCTTACAAATGACGCGACGCATTCAAAAGAAAGTCGATAAGGAGGCAAAGATTTTGCAAGCTCTACGTCATCCTAATGTACTTGCTTATTATGGCCGCATAGCTGGAACTTCCACGTTGGTGACAGAGTATCTAGGAAAGAAAATCTCTGTTGGTGAAGAAAATATATCCTTCAATAGCGTAAGGGACTTACTAGATGAACTTGAAGATGACGTACCTTGGCAAGTCCGACTACACGTGGCTTTGGAAACCGCCAAGGGGCTTTCATATCTTAATGATGTGGAATGCATACATTGTGATTTAAAAGCGGCCAACGTATTTCTCGGTAGTGATGATAAGAGTGAATGGATCGTTAAAATAGGTGATTTCGGAGAATCCAGAGCAGAACACAAAGATTATATGTTCACGCAAGTCTCTTCTCGTGATCCCCAGAAAACCATAGGTGGGACAGTCCCTTTTACAGCTCCTGAAGTTTTGAGAGGAGAGAAACCCACCACACGATCGGACGTGTATAGTTATGCTATGCTCTTAGTTGAACTTCTTTGTCCTTCGAGGAGTAATCCATGGGAAAAAGATTGTAAACCGCTGTGCATTCTCTCCAACGTAATGATAGGAAGACGGCCTACTTTACCTGAAGAGGTTGAGGGACTTCAATCTGCTATTCTGTCAAGTCTTTTATGTTTGATAAAACGTTGCTGGCATGAAAATCCTACCGAAAGGCCAAATTTTAAAGAAATAACTCAAGTGTTGAAAAATATGAAAGACTTACTTGCTAATGATGAAATTACGAAACATACTGAAAGTGTTTCTCGTGCCTCAAAAGGAAACTTCGATGTAAAGGATAATTCTGCAAAAGGTTGCACAGGAATTAAAATAACAAATTTGAGAATGCATCAGGGTACTGTACTGGAAACCGTTGGCGACATAGCTGCTTCCTTCGTAGAGGCTGGTAGTGCAATGCCAAGTGAACTTCAAGGAGACATGGAAAAGCACGCTAAGAAATTCGATGGATCCAATGGATGCACATTTTTTTCTGTTGCACTCGCTGATTGGTTAGAGGGTAAAGGATCTGAAATATATATTTTCGATGCGTCACAAGAAATAAAAGAAGTCACCGAAAGATTTCTTTCGAATATTCCAAAGGTTATTAACGAAATACGGGATGTATCTTCTTACTTCAGTGTCGAAGAGGCTCTTACTATATTACGTACCGCAGGTCTTTGCGAAACGTATGACACGACAGCCTTAATGAACAGCTATAAAGGCGTAAACTCTAATGACGGCGAGGAAGCGCTGCTTACAGGATTAAAACATTTACATGACTGTAGACCTGCATTTTCAGTGTACACCTGCCAACCATTTTCTTTCTGCTTGTGTTGCCTCCCTTGTATTAATATTGAACCACAACAAAATTGTTTCATTATTGTCGACACGCACTGCATCCCTACGACTGTAGACGGCAATGGTAATGGAGCTGTTATCCAAATGAAATACGAGTCCAATGACATCAACAGTGCAAGTAAAACACTTGCTAATTGGATAAAGAGCCGTTTGATGTCATCGAACGTGGGTGCAAATCCTCAAGCTATTACTCTTTTGAATAAGAAGAAACCATGCACGTTTTCCCAGGAACTTAATACTACTTTGGAAAGTGATGAGGAGCTAATGGAGGCAATGTCGGGACACAGTATGCCTGCTTTCTCTCATGGTAACACACCTCCCCCCGAGATAAGAACAGCCGAAAAAGAGCAAGGCAATCACTTCGTTGACCAGGAAATAGAAGAAAAAGAGAAAGTCACAGACGCCAGCGACCAGAGAATAGAAGAAAATAAGAAAGTCAACCACTCTGGAGACAAAAGGACAGAAGAAGACAAAGAAATAATATGGAGAGGGCATCTGACTAAGTTTGGATATTCCAACTTTCACCCCTTTCAAATGAAAGCAATAAAAGCCGTTGAAAGCAATGAAGATGTCATCGTCATACAGGGAACAGAGTCTCAAGTGGGGTACCTGCACTCGAAGGGTATTGATGCTGTAAAGTTGGGGCGATGTGCTGGCGATCTTTGCCGTGAAAATGAGAGCAGATTATTTGGCGGTACAGATGAGGTGTTACCACGTATGGCCTACATGACTCCTGAATATTTTGAAAAGATGGTGAGTTATTTCATAAACAACAAGGAAAAAATAAAACTTATCGTGTTCGACGAAGTTCATAAGGTATTTGATCGCAATTCGGCATTTCGATCATGCTACGATCTGATCAAAGAGATCAAGTCATTGTTTTTTGACATCCCAGTTATGGCTCTAACAGCCACTCTGAGTGAAGAATCTCTCAAAACCATATGCGGTTTTCTGAACAAACCAATAGTCATAAAGGGAACGGTCAATAGGAAGAACATAAAGTTTAACATTCTAAAATATGAACACAAAAAGATGAAAGGTGAAAACTCTAAAATCGTATCGACACCCTGGTCGAAGCTGGCATCTGAGATACAGAAACAAATCATCGATGACTATGCTATTGTATATATGGATTTTAAAATCGAAGTCAAAGAAATGGCAGCAAGTTTGATCGAGACTGGCATAGATGATGCAACTCCATTTTTTGGACAGGTGTCCTTGTGCAAGAATTTGGCAGAGTACAAGGACGATCAGCGATTAGGATACTGGACAAAACAGTGCACCGACGAAGAATCTAAGAAAATAATCCACAACTATTTCACTTGCTGGAAGTGGATTTACTCACTGTATACTGGTAGGTGTTTACGAGAGGGTGTACTCGATTATTTTGGAGAGACTCTCGATTCTCCTGAAATAGTTGCAAAAGGAGACTGCTGTACCTGCTGTGACGAGGAAGCTGAAAGAAATTGTAACATTCGTCCTTTAGCCCTTCTGTTAGCCAAAGCCTTAGAAGAATTAAAACAATGTTTGCAATTCAAGGATGGTGTCCCTGAAGCTAAAGTAATATCTTGGCTGAGGGGCTCTAAACAGGACTGGCTGGCCGGTGAAGAAATCCAAAGTATCATAGAGGAGTCTGAGACATATGGTAAAGGTCTAACGATGGACAGCAAGATGTATGACCAGCAAACGTGGGAGAGGATCCTCAGACAATGTATTCATCATGACATTATACAAATAAATTTCAAGTTTATAAGGGCTTCAAATTTTACAAGAACCTACAGGTTGTATTGTCTCACAAGCAACGGCCGAGAATTTATCGATAATCCTCGCAAAATATTAACTCTGAGTCCAATCATCAATCCCTTTGAAATCAAAGAGAATGCCAAACAGAGCACCAAGAAGCCTATCAGGAGGAAAAACAGAGGATGCCACATAATCCCAAAAATCAAAGAGCTTTTGAGAAACAAAACGAATTGGACAACCATCACAAAGCGTGACGAATATGAATTTCCTGgtttcggtgacaataggccatatgcactaacgggtcacgtgacccaactttctcaaatcaagcagcagtgtcaaaatgaactccagaaatga

Transcript

alvinactis_v1_g12929

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00270	DEAD	DEAD/DEAH box helicase	Domain	Interproscan
PF07714	PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000719	Domain	Protein kinase domain	Interproscan
IPR001245	Domain	Serine-threonine/tyrosine-protein kinase, catalytic domain	Interproscan
IPR008271	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR011545	Domain	DEAD/DEAH box helicase domain	Interproscan
IPR014001	Domain	Helicase superfamily 1/2, ATP-binding domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR036388	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR050167	Family	Serine/threonine-protein kinase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23257	SERINE-THREONINE PROTEIN KINASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0007165	Biological Process	signal transduction	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-