Detailed information of alvinactis_v1_g1276 in Alvinactis idsseensis sp. Nov. Gene info
Gene IDAnnotationChromosomeStartEndStrand
alvinactis_v1_g1276HYPOXIA-INDUCIBLE FACTOR 1 ALPHAchr_12151717921530249-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00989PASPAS foldDomainInterproscan
PF08778HIF-1a_CTADHIF-1 alpha C terminal transactivation domainDomainInterproscan
PF14598PAS_11PAS domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000014DomainPAS domainInterproscan
IPR001067FamilyNuclear translocatorInterproscan
IPR001610RepeatPAC motifInterproscan
IPR011598DomainMyc-type, basic helix-loop-helix (bHLH) domainInterproscan
IPR013767DomainPAS foldInterproscan
IPR014887DomainHIF-1 alpha, C-terminal transactivation domainInterproscan
IPR035965Homologous_superfamilyPAS domain superfamilyInterproscan
IPR036638Homologous_superfamilyHelix-loop-helix DNA-binding domain superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR23043HYPOXIA-INDUCIBLE FACTOR 1 ALPHAInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000977Molecular FunctionRNA polymerase II transcription regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005667Cellular Componenttranscription regulator complexInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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