Detailed information of alvinactis_v1_g10385 in Alvinactis idsseensis sp. Nov. Gene info
Gene IDAnnotationChromosomeStartEndStrand
alvinactis_v1_g10385LYSINE-SPECIFIC DEMETHYLASEchr_564500716497830-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF000017tm_17 transmembrane receptor (rhodopsin family)FamilyInterproscan
PF00370FGGY_NFGGY family of carbohydrate kinases, N-terminal domainDomainInterproscan
PF00515TPR_1Tetratricopeptide repeatRepeatInterproscan
PF02373JmjCJmjC domain, hydroxylaseDomainInterproscan
PF02782FGGY_CFGGY family of carbohydrate kinases, C-terminal domainDomainInterproscan
PF13431TPR_17Tetratricopeptide repeatRepeatInterproscan
PF21322KDM6_C-helLysine-specific demethylase 6/UTY, C-terminal helical domainDomainInterproscan
PF21326KDM6_GATALKDM6, GATA-likeDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000276FamilyG protein-coupled receptor, rhodopsin-likeInterproscan
IPR003347DomainJmjC domainInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR017452DomainGPCR, rhodopsin-like, 7TMInterproscan
IPR018484DomainCarbohydrate kinase FGGY, N-terminalInterproscan
IPR018485DomainCarbohydrate kinase FGGY, C-terminalInterproscan
IPR019734RepeatTetratricopeptide repeatInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR043129Homologous_superfamilyATPase, nucleotide binding domainInterproscan
IPR046941Homologous_superfamilyLysine-specific demethylase 6, GATA-like domain superfamilyInterproscan
IPR048560DomainLysine-specific demethylase 6A/B-like, GATA-likeInterproscan
IPR048562DomainLysine-specific demethylase 6A/B-like, C-terminal helical domainInterproscan
IPR051630FamilyTranscriptional Corepressor and Histone DemethylaseInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR14017LYSINE-SPECIFIC DEMETHYLASEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005975Biological Processcarbohydrate metabolic processInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0010468Biological Processregulation of gene expressionInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0016301Molecular Functionkinase activityInterproscan
GO:0031490Molecular Functionchromatin DNA bindingInterproscan
GO:0044666Cellular ComponentMLL3/4 complexInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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