Detailed information of alvinactis_v1_g1031 in Alvinactis idsseensis sp. Nov. Gene info
Gene IDAnnotationChromosomeStartEndStrand
alvinactis_v1_g1031PCD6 INTERACTING PROTEIN-RELATEDchr_11758837217645891-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
--

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00102Y_phosphataseProtein-tyrosine phosphataseDomainInterproscan
PF00169PHPH domainDomainInterproscan
PF00595PDZPDZ domainDomainInterproscan
PF03097BRO1BRO1-like domainRepeatInterproscan
PF13949ALIX_LYPXL_bndALIX V-shaped domain binding to HIV DomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000242DomainTyrosine-specific protein phosphatase, PTPase domainInterproscan
IPR000387DomainTyrosine-specific protein phosphatases domainInterproscan
IPR001478DomainPDZ domainInterproscan
IPR001849DomainPleckstrin homology domainInterproscan
IPR003595DomainProtein-tyrosine phosphatase, catalyticInterproscan
IPR004328DomainBRO1 domainInterproscan
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR016130Active_siteProtein-tyrosine phosphatase, active siteInterproscan
IPR025304DomainALIX V-shaped domainInterproscan
IPR029021Homologous_superfamilyProtein-tyrosine phosphatase-likeInterproscan
IPR036034Homologous_superfamilyPDZ superfamilyInterproscan
IPR038499Homologous_superfamilyBRO1 domain superfamilyInterproscan
IPR045251FamilyVacuolar protein-sorting protein Bro1-likeInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR23030PCD6 INTERACTING PROTEIN-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0004725Molecular Functionprotein tyrosine phosphatase activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005768Cellular ComponentendosomeInterproscan
GO:0006470Biological Processprotein dephosphorylationInterproscan
GO:0016311Biological ProcessdephosphorylationInterproscan
GO:0032456Biological Processendocytic recyclingInterproscan
GO:0043328Biological Processprotein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathwayInterproscan
GO:0045022Biological Processearly endosome to late endosome transportInterproscan
GO:0071985Biological Processmultivesicular body sorting pathwayInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
------

TOP