Detailed information of alvinactis_v1_g10279 in Alvinactis idsseensis sp. Nov. Gene info
Gene IDAnnotationChromosomeStartEndStrand
alvinactis_v1_g10279UPF3 REGULATOR OF NONSENSE TRANSCRIPTS-LIKE PROTEINchr_547974924803325-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03467Smg4_UPF3Smg-4/UPF3 familyFamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR005120DomainUPF3 domainInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR039722FamilyNonsense-mediated mRNA decay protein 3Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR13112UPF3 REGULATOR OF NONSENSE TRANSCRIPTS-LIKE PROTEINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000184Biological Processnuclear-transcribed mRNA catabolic process, nonsense-mediated decayInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0045727Biological Processpositive regulation of translationInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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TOP