| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| alvinactis_v1_g10263 | TATD FAMILY DEOXYRIBONUCLEASE | chr_5 | 4600635 | 4603048 | - |
| CDS | |||||
| alvinactis_v1_g10263 | |||||
| Transcript |
| alvinactis_v1_g10263 |
| Protein |
| alvinactis_v1_g10263 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01026 | TatD_DNase | TatD related DNase | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001130 | Family | 3'-5' ssDNA/RNA exonuclease TatD-like | Interproscan |
| IPR012677 | Homologous_superfamily | Nucleotide-binding alpha-beta plait domain superfamily | Interproscan |
| IPR032466 | Homologous_superfamily | Metal-dependent hydrolase | Interproscan |
| IPR035979 | Homologous_superfamily | RNA-binding domain superfamily | Interproscan |
| IPR050891 | Family | TatD-type Metallo-dependent Hydrolase | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10060 | TATD FAMILY DEOXYRIBONUCLEASE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0005829 | Cellular Component | cytosol | Interproscan |
| GO:0008310 | Molecular Function | single-stranded DNA 3'-5' DNA exonuclease activity | Interproscan |
| GO:0016788 | Molecular Function | hydrolase activity, acting on ester bonds | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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