Gene detail

Detailed information of alvinactis_v1_g1024 in Alvinactis idsseensis sp. Nov. Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
alvinactis_v1_g1024	ACTIVATOR OF S-PHASE KINASE-RELATED	chr_1	17532993	17542191	-

Gene Structure

More details in Jbrowse Sequence

CDS

alvinactis_v1_g1024

ATGTCGACTGTTGCTCGTCGTTCTACTGTCCCGATTGCTCACGATCACGGTGGAACTCGAAGAGGAGGACTTCGATCGAAAACTCCTTCTGTGAATGAGCATTCTAAGAAATTGAAAAATACTCCAAAAGGCAAACGAAGGCTTGAGTTTGTTGAGCAACCACTGAAAGACAAAAAGTTCTACCTCGATCTCGAAGGATACAAGAAAGTATCAAGTCTAGCAGCTCGCATACAAGATCTTGGAGGGAAAGTTGAAGAATTTCTTAGTAAAGATATTAATTACTTAATCACCAATCGCAAGGATGTTGATACTAGACTTTCTCCCAGAAGTAACTCAACACCAAGTCCTGGGTTATCAATACCTAGCCCATTCCCAGCTACTGGTACTAGAAGTTCCTCTCTGAAAGGAGCTTGGCCACTTAGTGGAGATTCCCCACAAAGCATTGAGACACATCAACCTGCACCCAAGCATGATACTAGAGCCCAGGCTATCATGAAACAAGCCCAGGCTACTCTGACTAACAGATACGGTACCAGCAACATCTTGACAAATGCTAGGACGTGGGGTGTATATGTCATTTACTTGGACAAAGTTTTAGAAAAACTGGCAGAGTTTGGTCCAAGCCAGGCTGAAAAGCAACCCTCTATCAAGGAATTAATGGTATACGGAAAGAAGCAATTGAGAGTAAAGATAAGAAAATTGCAAGTCCCATTTATTAAAGTTGAAGACCAGAGTCGCCAGTATAGGCCATTAGTTAAGGAATTCAAGGAATGGCCTCTTCCGGACTTTGATTCTCCTGTTGGTACTTGTCCTTTTGACACCCCAAGGGAAAGAAGGGACCAAGAACCAAAGAAAAGAATCAAGGACAAATACCAGCAAAAGGATGCTAAGAAACAGCAGGCTAAAAAAGGCTACTGTGAATGCTGTTGTTTACACTACAATTCTTTAGATGTGCATTTAAAGAGTGAACACCACCAATCATTTGCACGAAAAGACGCAAACTACGAAAGTATTGATCAGCTCATCAGTCAAGGACCAAGTTTAAAGGTTTTCTTGGAAAAGATGAGACTCAAGTACAGTGACAAAAGAACGCATGACAAACACCGAAGCCACGACGAGTCTCGGAATCCTTTCCAGACTCCCTCAAAGGACGATGACATTGATATTTTGGATGGAAAAGATGAAACCACTCCAGATAACAATGCCAAGAAGATGAATAAAAAAGGCGGGAAATGTATACAGGGCAAAGACAGGACCCTCTCCGAAGAAAGCTACCCTGAAAATGACAACCACATTTCTACAATACCCTTAAAAACAAAGGAAGCTGCACACAAAACTACGACATTAAACACTTTAGAAGATTTCGAGACCAGACGAATGACACGAAGTCGGTCATCCCCTAGCAGTGTAAAGCTCAATGAGATAACTGCCCTGCTTGACGAAGAGATGATCAAGGAGATCCCCATGGAAAAGAATAAGGCAGTGGCAAAGGTACAGGAGCAAGATGTGCAGAAATCTGACCCACAGCAAGAATTCCAGCAGACACAGCACGCATCTAGTGGAGCAGACACTGCTGAAGGAAGTGAGAAACACACGAGGAATGATGCCCAACCTCAAGTTATGGAAAATAGAGATGAAGAGGCGACTAAACACGTCGAAAATGACACGGCAAAGGATTCGGCGTCTGGTGAAGAACCAACTTTCACGAGACTACGATCTTCCAGGAAACCATTCCATGATGATGTCGAGCAGTCCAAAACCAAACGCGTCCTACGAAGCAACAGTAAAAGTTGCAGTTCAGACAGTACCGAGGCGTTGTCCAATCAGCAGGTTGTTAATCCTAGTTCTCCCAGAAAACGTCGAGATACAGACCACTTTTCTTCCAGTACTATTTCCTTGTTGGAAAAAAGCACTAAGAGTGACCTTGATGACTCGCCAAGGAAGCCTTCCATAAGGCCAGATTCAAATGTTAGGAAGACAAGAAGTAAGGTTGACAAAACATCACCAGAGATCGACTGTGACAAATCGAACGATTACGAAGACAAACGTCCCGTGATATCTCGATCAATTCCACCTCAATTCAGTTCAAGCCCAAGAAGTGGATTCGCTGTCAACAGGGTTGACGACAATTTGTCAGACGGCGAGGAAAAGAATTGCTCAATGAGAGCTGAGGCCGGGAGCTGTCCTTCTACACCAAAAGCGAGCAAATGTCGCAAGAAATCCCAGGGAAAAAGGAACAAAGAAGGAGCCTCAGGCCATCCAACTAATGAAGAAGTGCAGGGCTCCAATGCAAATACCCAAGATGACCTCGAAAAAGAACGGGAAAAGTCTGCGAAGGAGCTCGAGGAAACTTACACGACTTTGTTCGATTCAGATGATGATGAACCTTTTGAAGGTTTTGAAATCCCTCATTTTGAAGGCTCTTCAGATCCCGATTTGATGTACCGTGTCAAAGAAATCGTCAACTATTATATTTCAAGTCAGGAGAGTACTCTTGTTGAATCAGGTGATGAAGAACGAAGTGGACACACCGAAGACactgcaggaaccgaagcaaagaaaaagaaacgttcaccacatggtattaaagtgatactcagttccagaacagatgaaagtgatgacgatGTCTTtgaagataagaatgatgatgatgatgtttcttttgttgttgaagacgacgatgattatgatACCAGTAGTACCGTGGCTGATAGCACCGATGGTAACGAAGATGAACATTTACTCTCCTCCCCATTGCGTATGGATACCCTTTATAGCAAGAGAAAGTCATGGAATTTGGACGACATGGAAGACAACAAGCCAACCAAGAGAAGAAGGACTACATCTGGTGGTGAATATAATGATGAAGATGTACTGCAAACTTCCATGGATTATTTGAAAGATGAACTACCATCCACAAGCCAAAGTTCATGCAGTGATTTTCATCATTCCACCGCCACATCTACAGATAGCAAGGAAGAAACTGAGAACATCGACATACAAAAACGTCCAAATACAAGATCGAGAACAACTAGAAACAAACAGCCATTAGACAAGCAAAATTGTGGTACCGACGCGGTAGACACGCAGTCGACGAGACGTGTCACGAGAAGCCAGGATGTAAAGACTACAGTGTCTTTAAAAAGGTTGGAAACCAATGAATGGAAAGTGGTCTGTGACAATGATCAACGGAAACCTTCCACGAAAAAGCCAAAAAATAACAACAACACAATCGAAGCAAGTTCGTCGTCCAGAACAAATGAACACACTGACACAGAAAATCGTACCTCTGAGGTTTCCAAGTCAGAatcgtcgtcatcgtcatcatcgtcatcattcgtGGAGAGAGATGAAAGCTGTAGGGATGCGTCGATCGCAAACGAAATTCCTCAAGAATTTCTCGAGCCCTCTGTTGTACTCATGTCCATTGAAGAACGTGTCAAATTGCGGCAGCTTGAAAAGTGGGCACAGAGACAGTCCGAATGTACTGTCAAGAACGAATCAGATTTAACACAAACCAAAGCGGTACAGGAAAGAGATGAATCTCAATCTAACGAAAAAGTGGAAAAAAAGAAAATCAGATCTGCAAGTGTCACACAAGCAAAGAAGTTATCGTCTGTCAGCAGAAGATCGTCTCGCAATGATTCCACTTCCAGTACTGACATGAGCACAAAGCTAAGGTCTCGTAGTCATCCAAAACCAAACGATATATTTACTAGTACAGCTGACAACGTCAACTCGACTCCATTTCAGAAGAAAAGCGTCAAGGTTTTCTCGCCCACGAACAATCGAAACCAAGCCCAAAATGCAGCTTGGATATTTAATCGTGACAAATTCACAGCGTCGACTCCACAGTCTTCTAGGAAAACCAGGTCTACAAAGACGGTGGAGAGTTTGGAAGGTGGAGCCCCAACCACACGAAAGCTGCGTAACACTAGCAGGTGCCTGATAGCAGGAGATAGCTATGAGTTCATGGATGAAGATGCTTATGCATTTGATTGA

Transcript

alvinactis_v1_g1024

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07535	zf-DBF	DBF zinc finger	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006572	Domain	Zinc finger, DBF-type	Interproscan
IPR038545	Homologous_superfamily	DBF-type zinc finger superfamily	Interproscan
IPR051590	Family	DNA Replication Regulatory Kinase Subunit	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15375	ACTIVATOR OF S-PHASE KINASE-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0010571	Biological Process	positive regulation of nuclear cell cycle DNA replication	Interproscan
GO:0031431	Cellular Component	Dbf4-dependent protein kinase complex	Interproscan
GO:0043539	Molecular Function	protein serine/threonine kinase activator activity	Interproscan
GO:1901987	Biological Process	regulation of cell cycle phase transition	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-