Gene detail

Detailed information of alvinactis_v1_g10227 in Alvinactis idsseensis sp. Nov. Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
alvinactis_v1_g10227	PANTOTHENATE KINASE	chr_5	4031436	4044410	-

Gene Structure

More details in Jbrowse Sequence

CDS

alvinactis_v1_g10227

ATGAGCGATCCTAGTGGTCCTGGATATGCTGCGAGTATTTTTCTTCCACAAGTATTCCGCAACATGAGGAATGCCAAACTTTTCGCTGTTGACATCGGAGGATCCCTGGCGAAGGTGGCCTATATGTCCGATATAAACCGCATACGAAAACGACACGCAAGCTTTTCCTCTGATGATTCAAGTGCAGAGTACACATGTATCACCACAGGAAGCCCAATCTATGAGATAACAGACGAGCAAGTATCGGGGCGAAGACTACACTTTATCAAATTTGAAACCAAATATGTAGAAACTTGTGTGGATTTTATTAGGGAGAATATACTAGAACAACCTGATGATTTGGTTAGAATATTGAAAGCAACAGGTGGTGGAGCACATAAATATACAGATCTTTTAACAGAAAAGCTAGGAGTAAGGGTTGAGAAGGAAGATGAGATGCAGTGCTTGATAAGAGGATGTAATTTTGTCCTTACTAGTCTGGCTAATGAGGTTTATGAGTTCCGCAGAGATGAAGAACCACAATATGTGTTCCATCATCATGACTCTATAGATATATATCCTTATTTGCTGGTCAACATTGGCTCAGGAGTCAGCATACTCCAGGTTGAGTCAAAGGATAAATTCCAAAGAGTAGGAGGGACTAGCATGGGTGGAGGGACATTCTGGGGACTTGGGTCTCTGCTTACCAATGCAAAGGGTTTTGATGAACTCTTGGAGCTTGCTACTCAAGGACAGCACAAGAATGTTGATATGTTGGTTAAGGACATTTATGGAGGTGCGTATGCTGACATCGGACTTCCTGGAGATTTAACAGCATCTAGTTTTGGAAAAGCCATCCGGTCGTTTCATGACAGTCAGGAGTGTGGTCACCAATTTGCTGATGCTGATGTTGCTAAGTGCTTACTTCACATGATTAGTAATGACATTGCGCAGATTGCATCACTCTACGCTCGCTTATCAGGAATCAAGAAGATATTTTTTAGCGGATACTTTATACGAGGCATACCTGTCACTATGCATACGATTACTTTTGGGGTTAATTATTGGTCCAAGGGTGAGCAGTTACCACTGTTTTTACGACACGAGGGCTACCTAGGAGCCATTGGAGCATTCCTGAAAGGAGCAGAAGAAGATGGCAACAAAATAGATTTATCTTTATCTAAACGGTTTTCATTTTGGGGTGAGAACTTCGCAGGCAGCTCAGGACTGCCTTCTGTGAATGTCAAGTTGAGGGAAAGTAATGCAACGGACGAAGTGAAACTGGAGAAGAACAAAGACAGTGTCTTTCCAGAGTGCGATGTCCTTGAACTCGATCAGTTATCTCGACAACTCGAACTATTTCCACTGCTAGCTTCAGCAGTAGAATACTTTCCTGATACAGAGGACCTGATGGCTGATGTTGCAGCGAGAACATACTGGTTAGAGTGCTTTAGAACGGCTTTGGATGAGGGTGTCGAGAGAGCAATTGCTAGTCAACCATATTCTCCAGATGCGAAAGAAAGAGCAGAAAAGTTTCGCACCAAGTACCTCACATTTTTAGATGCTTTTCACAAGAAACCATTCTCCTACGGTTCGCTCACTGTGCGTAGTTTACTTGACACACGAGAACAGTGCTTGGAGGAGTTTGAGTTTCCTGATCCTTTCGCTGAGGTAAAAATGCAAGAAAATCAAGACGCAATAGAGCAATTTTCTCAAAGATTACAAGAACTTGATAAACTATCAAATGATGAGCGGCAAGAGACCCTAATCCGTGGTGTTTTGGCTGGGAACGTTTTTGACTGGGGAGCAAAAGAAGTCGCAGAACTTATGGATAAAAAGTTGCTTGCTTTCGAGACAGCTATGGACAAGCTTCAAAAGCGGCCGTGGTTGATAGACGATCTAGATGAATGGATACAGAACACCCAAGACAGGGTGTATAAGAAGGTTTTAGTGTTTGTTGATAACAGTGGTGTTGACATCATAATGGGGATTTTCCCCTTCGTCAGAGAACTACTTACACGAGGAACGAAGGTGATTCTTGCAGCGAACACTTATCCAGCCTTGAATGACGTCATGCATAGCGAGTTGGTGATCTTATTACACGAgatagcagcattatgtcctgttatcaaGTCAGCGGTAGAAACCAGGCAACTCGTCGCCATGGAAACAGGATCCAGTTCACCTTGCCTCGATCTCAGACGTATAGATGCTGACTTAGCCATACAAAGTAAAGACGTCGACCTTATCGTCTTAGAGGGAATGGGCAGGTGTATACATACAAACTTTACAGCTCAGTTTACGTGTGATTCTCTCAAGCTTGCAGTCATAAAAAACCGGTGGTTGGCAAACAGACTTGGTGGAGACATGTATAGTGTTGTATGTCGATACACTAAGGGTGTGACAAGCACATGA

Transcript

alvinactis_v1_g10227

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01937	ARMT1-like_dom	Damage-control phosphatase ARMT1-like domain	Domain	Interproscan
PF03630	Fumble	Fumble	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002791	Domain	Damage-control phosphatase ARMT1-like, metal-binding domain	Interproscan
IPR004567	Family	Type II pantothenate kinase	Interproscan
IPR035073	Homologous_superfamily	At2g17340, three-helix bundle domain	Interproscan
IPR036075	Homologous_superfamily	Damage-control phosphatase ARMT1-like, metal-binding domain superfamily	Interproscan
IPR043129	Homologous_superfamily	ATPase, nucleotide binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12280	PANTOTHENATE KINASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004594	Molecular Function	pantothenate kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0015937	Biological Process	coenzyme A biosynthetic process	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-