Gene detail

Detailed information of alvinactis_v1_g10119 in Alvinactis idsseensis sp. Nov. Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
alvinactis_v1_g10119	COPPER AMINE OXIDASE	chr_5	2799084	2803313	-

Gene Structure

More details in Jbrowse Sequence

CDS

alvinactis_v1_g10119

ATGACTCGGTCTACGGAGTACTCGCATCCGGTTGAGGGAGAACAAAAAGTCAAGACGTCGATAATTTGGAAAATCCTGACTCTAGTTTTGCTTTTGGTATGCATTGCTCTGCTTATCGCCTTAATCGTGGTTGCTACCTCATCGCATACGTCTGGGAAAGATCATGCAGGCAAGAGCGACTTGGTGGCAAAGCCTTGCTCTACTACTGATGCCCCAGGTATCGAAATATCTCGTAAATCTTCAAGAATCTTTGAAGACCTCAGCGCAGAAGAGATCACCGCTGTCCGAGACTATATGTATGCAGACAAGAAGCTAAATATCACGCCGTACGAGAAAGCTTTAGTGAGTGATAATTATATTTACTTTGTCAAGCTTCGTCCACCATCCAAGGCCAACGCCCTTAAGCATCTCGACAACAATGGCCCCAAACCCCGACGTGAGGCGATCGTATCTGTGTATGCAGGTGGTAGAACCCCTCCAGTAGTCGAAGAATACCTTGTTTTCCCCGCACAGAAACCTACCGAGCACGAAGAGCACAAAGTTCCAGGTCAAAGATATCCAATTCCTTTTGACTCGCGCCCATTTGATGAAACCATTGAAGCGGGACAAATTACCAGAATGATTCGCGAGGCGACAACCAAGGTGAATAGTCTTATGCTGAAAAGCTATGATGGCTACTCGTTTGGAGGGAATTGCAGCGATCGTTGTCTAACATACATGTATGCATCCCCCATGGGATTTTATAGCTATACGCGAAAGACTTGGTTCTGGCTGATGCGAGATGTTCCAGGGAAGTACGAAAATCCTGTCAATTTTGACGTGTACATCAATCACAAGGGGTCCGACGTCTCTAAGTGGGTAATAGAACAAATTGTATACAATAACCAGTCTTTTGCATCGGCAGACGAACTGCTGAATGCATACAATGCAAAAACACTGAAGGTGAGTGTCATGCCTGCCCCATCTAAAGATAAGCTGTTTTCCTCTTATGAAAAACGAGGGTACCCGCAACCTGCCAAGCCCTCGAGGGGACCCGAGCTGTACGAGCCTGATGGAAAACGTTATGCAGTCGATAACCGCCGTGTGGAATACATGGGATGGGAATTCGAGTTCCGCGTTGACTCTATTAATGGAATGGAGCTTTATGATATTCGTTTTCAAGGGGAACGCATTGTGTATGAGCTAAGCCTTCAAGAAGCTATCGCTACCTACACGGGCTACTTTCCATCTCAAACCTACATGTATTATTTAGATGGAAACTGGAGGCTTGGAATGAGCAGCTTTGAACTTGTGCCAGGAATTGATTGCCCTAAAACGTCTTCGTTTTTTAACTTGACGCACATGATAGGAACTGCAAATACAGTGACCATGAAGAACGCGGTCTGCGTCTTTGAACAAAATACAGGTATTCCATTACGTAGGCACGAGGACAGCGACTTTGCAAGCAGCTATAACTTCTATGGTGGCATGGCAAACAACGTGCTTATCCTTCGCACTATTCCTACTGTCTATAACTATGACTACGTGTGGGACTTTATTTTCTACCAGAATGGTATCATTGAAGTACGATTGTCTGCCTCTGGTTACGTCATGGGATCATACTACACTGATGACGCCAAACCGTATTGTTACAAACTATCCGAATACGGAACGGGTTGCACGCATGAGCACTTGATTAACTTTAAGGTCGATATGGATATCCTTGGAACAGAAAACTCCTATGAAACCATAGAGATTGGCATCGAAAATGTTACCAGTCGCTGGATCAATGACCTATCACGCGTGCGCAAGGTGCTGAAACCGCACACCAAACAGACCGAACTGGAAGCTGTGTACAAGTTCAACTTTGATCGACCAACGTATTTGAATTTCTATCACGAGGGAAAAAATAATAAAATGGGGGTGCGAAGAGGGTATAGGATACAGAATGAAGGGCTTACAAAGCTGTTGTATCCTGAGGATTGGATGCTGGTACCAATGATAAGCTGGGGACTCTATCAAATGGCTGTAACCAGGCACAAAGACAATGAGAGGTACAGCTCTTCCGCTTACAACCAAAACTCAGGCGTAGATCCTCAGGTAGATTTCAGAAAATACATCGCAGACAACGAGAGTGTTGTCAATCAAGATCTAGTTGCCTGGGTAACCATTGGAATGATGCATGTGCCTCACTCTGAAGACATCCCAAACACGGCAACAGCGGCCAACACAGCTCGATTCTTTATCAGGCCTTTCAACTACTTCGACGAAGACCCGTCCATTGGTTCAACCAATGCTATTCTAATGACCCCCGAGAAGGGCGGTTCTAACAAAGTAGAGCACTATGGTACACCCACTGGTCCTGTCTGTACCCCTCGAAATTATACCATGCGCTTCAGCGGTGTCTACTGA

Transcript

alvinactis_v1_g10119

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01179	Cu_amine_oxid	Copper amine oxidase, enzyme domain	Domain	Interproscan
PF02727	Cu_amine_oxidN2	Copper amine oxidase, N2 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000269	Family	Copper amine oxidase	Interproscan
IPR015798	Domain	Copper amine oxidase, catalytic domain	Interproscan
IPR015800	Domain	Copper amine oxidase, N2-terminal	Interproscan
IPR016182	Homologous_superfamily	Copper amine oxidase, N-terminal	Interproscan
IPR036460	Homologous_superfamily	Copper amine oxidase, catalytic domain superfamily	Interproscan
IPR049947	Conserved_site	Copper amine oxidase, copper-binding site	Interproscan
IPR049948	Conserved_site	Copper amine oxidase, TPQ-binding site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10638	COPPER AMINE OXIDASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005507	Molecular Function	copper ion binding	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0008131	Molecular Function	primary methylamine oxidase activity	Interproscan
GO:0009308	Biological Process	amine metabolic process	Interproscan
GO:0048038	Molecular Function	quinone binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-