| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| add.PMEG.utg000058l.76 | ATP-DEPENDENT RNA HELICASE | chrom10 | 51222686 | 51227653 | + |
| CDS | |||||
| add.PMEG.utg000058l.76 | |||||
| Transcript |
| add.PMEG.utg000058l.76 |
| Protein |
| add.PMEG.utg000058l.76 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | E3|E3 activity|RBR |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00270 | DEAD | DEAD/DEAH box helicase | Domain | Interproscan |
| PF00271 | Helicase_C | Helicase conserved C-terminal domain | Domain | Interproscan |
| PF01485 | IBR | IBR domain, a half RING-finger domain | Domain | Interproscan |
| PF07717 | OB_NTP_bind | Oligonucleotide/oligosaccharide-binding (OB)-fold | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001650 | Domain | Helicase, C-terminal domain-like | Interproscan |
| IPR002464 | Conserved_site | DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site | Interproscan |
| IPR002867 | Domain | IBR domain | Interproscan |
| IPR007502 | Domain | Helicase-associated domain | Interproscan |
| IPR011545 | Domain | DEAD/DEAH box helicase domain | Interproscan |
| IPR011709 | Domain | DEAD-box helicase, OB fold | Interproscan |
| IPR012677 | Homologous_superfamily | Nucleotide-binding alpha-beta plait domain superfamily | Interproscan |
| IPR013083 | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR014001 | Domain | Helicase superfamily 1/2, ATP-binding domain | Interproscan |
| IPR017907 | Conserved_site | Zinc finger, RING-type, conserved site | Interproscan |
| IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR035979 | Homologous_superfamily | RNA-binding domain superfamily | Interproscan |
| IPR044066 | Domain | TRIAD supradomain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR18934 | ATP-DEPENDENT RNA HELICASE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0004386 | Molecular Function | helicase activity | Interproscan |
| GO:0005524 | Molecular Function | ATP binding | Interproscan |
| GO:0005622 | Cellular Component | intracellular anatomical structure | Interproscan |
| GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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