Detailed information of XP_032904259.1 in Amblyraja radiata Gene info
Gene IDAnnotationChromosomeStartEndStrand
XP_032904259.1RNA RECOGNITION MOTIF-CONTAININGNC_045986.12903312929104827+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00076RRM_1RNA recognition motifDomainInterproscan
PF07744SPOCSPOC domainDomainInterproscan
PF20809MINT_MIDMsx2-interacting protein, MID domainDomainInterproscan
PF20810MINT_RIDMsx2-interacting protein, nuclear receptor-interacting domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000504DomainRNA recognition motif domainInterproscan
IPR010912DomainSpen paralogue/orthologue C-terminal, metazoaInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR012921DomainSpen paralogue and orthologue SPOC, C-terminalInterproscan
IPR016194Homologous_superfamilySPOC-like, C-terminal domain superfamilyInterproscan
IPR034172DomainSHARP, RNA recognition motif 1Interproscan
IPR034173DomainSHARP, RNA recognition motif 2Interproscan
IPR034174DomainSHARP, RNA recognition motif 3Interproscan
IPR034175DomainSHARP, RNA recognition motif 4Interproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR049093DomainMsx2-interacting protein, nuclear receptor-interacting domainInterproscan
IPR049095DomainMsx2-interacting protein, MID domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR23189RNA RECOGNITION MOTIF-CONTAININGInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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