| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| XP_032880007.1 | TRANSCRIPTION INTERMEDIARY FACTOR | NC_045962.1 | 34068344 | 34301671 | - |
| CDS | |||||
| XP_032880007.1 | |||||
| Transcript |
| - |
| Protein |
| XP_032880007.1 |
| Gene family | Subfamily |
|---|---|
| Transcription Factors Family | MBD |
| Ubiquitin Family | E3|E3 activity RING|PHD |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00439 | Bromodomain | Bromodomain | Domain | Interproscan |
| PF00628 | PHD | PHD-finger | Domain | Interproscan |
| PF01429 | MBD | Methyl-CpG binding domain | Domain | Interproscan |
| PF02791 | DDT | DDT domain | Family | Interproscan |
| PF15612 | WHIM1 | WSTF, HB1, Itc1p, MBD9 motif 1 | Motif | Interproscan |
| PF15613 | WSD | Williams-Beuren syndrome DDT (WSD), D-TOX E motif | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001487 | Domain | Bromodomain | Interproscan |
| IPR001739 | Domain | Methyl-CpG DNA binding | Interproscan |
| IPR001965 | Domain | Zinc finger, PHD-type | Interproscan |
| IPR011011 | Homologous_superfamily | Zinc finger, FYVE/PHD-type | Interproscan |
| IPR013083 | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR016024 | Homologous_superfamily | Armadillo-type fold | Interproscan |
| IPR016177 | Homologous_superfamily | DNA-binding domain superfamily | Interproscan |
| IPR018359 | Conserved_site | Bromodomain, conserved site | Interproscan |
| IPR018501 | Domain | DDT domain | Interproscan |
| IPR019787 | Domain | Zinc finger, PHD-finger | Interproscan |
| IPR028941 | Domain | WHIM2 domain | Interproscan |
| IPR028942 | Domain | WHIM1 domain | Interproscan |
| IPR036427 | Homologous_superfamily | Bromodomain-like superfamily | Interproscan |
| IPR037374 | Domain | BAZ2A/BAZ2B, bromodomain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR45915 | TRANSCRIPTION INTERMEDIARY FACTOR | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000790 | Cellular Component | chromatin | Interproscan |
| GO:0003677 | Molecular Function | DNA binding | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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