Detailed information of XP_032874872.1 in Amblyraja radiata Gene info
Gene IDAnnotationChromosomeStartEndStrand
XP_032874872.1E3 UBIQUITIN-PROTEIN LIGASE TRIMNC_045956.12508821025123636+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00638Ran_BP1RanBP1 domainDomainInterproscan
PF00643zf-B_boxB-box zinc fingerDomainInterproscan
PF12185IR1-MNup358/RanBP2 E3 ligase domainDomainInterproscan
PF13445zf-RING_UBOXRING-type zinc-fingerDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000156DomainRan binding domainInterproscan
IPR000315DomainB-box-type zinc fingerInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR022011DomainNup358/RanBP2 E3 ligase domainInterproscan
IPR027370DomainZinc finger, RING-type, eukaryoticInterproscan
IPR050143FamilyTripartite motif-containingInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR24103E3 UBIQUITIN-PROTEIN LIGASE TRIMInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0046907Biological Processintracellular transportInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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