Detailed information of XP_032874850.1 in Amblyraja radiata Gene info
Gene IDAnnotationChromosomeStartEndStrand
XP_032874850.1E3 UBIQUITIN-PROTEIN LIGASE UBR5NC_045959.11182941911976153-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity|HECT
Ubiquitin FamilyE3|E3 activity|UBR-box

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00632HECTHECT-domain (ubiquitin-transferase)DomainInterproscan
PF00658PABPPoly-adenylate binding protein, unique domainFamilyInterproscan
PF11547E3_UbLigase_EDDE3 ubiquitin ligase EDDDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000569DomainHECT domainInterproscan
IPR002004DomainPolyadenylate-binding protein/Hyperplastic disc proteinInterproscan
IPR003126DomainZinc finger, UBR-typeInterproscan
IPR009091Homologous_superfamilyRegulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIInterproscan
IPR024725DomainE3 ubiquitin-protein ligase UBR5, ubiquitin-associated domainInterproscan
IPR035983Homologous_superfamilyHECT, E3 ligase catalytic domainInterproscan
IPR036053Homologous_superfamilyPABC (PABP) domainInterproscan
IPR047503DomainE3 ubiquitin-protein ligase UBR5, UBR-boxInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR46276E3 UBIQUITIN-PROTEIN LIGASE UBR5Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000209Biological Processprotein polyubiquitinationInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0034450Molecular Functionubiquitin-ubiquitin ligase activityInterproscan
GO:0043130Molecular Functionubiquitin bindingInterproscan
GO:0090263Biological Processpositive regulation of canonical Wnt signaling pathwayInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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