Gene detail

Detailed information of XP_032872027.1 in Amblyraja radiata Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
XP_032872027.1	FATTY ACID SYNTHASE	NC_045957.1	134058173	134082007	+

Gene Structure

More details in Jbrowse Sequence

CDS

XP_032872027.1

ATGGAAAAAAACGGTGAAGATATAGCTATTATCGGAATAGGGTGTAACTTTCCTGGAGGCGAAGGCATTGATAATTTCTGGAAAGTTCTTCTTCAGGGAAGGAACTGTGTGGTTGACATTCCACCAAATCGGTTCGATACGACATTCTGGTATAACTCTGATGGCAACAAAGCAGGGAAAATGATCACAAAACGAGCAAGTTTAATCGAAGGGTTTAATGAATTTGATCACAACCTCTTTGACATAAGGCAAATCGAAGCCAATAGTATGGACCCACAACATAAACTTCTGTTGGAGTGCACATACAAAGTGTTTGAAAATGCAGGAATTCCTATGGAAGAAATCAGTGGGAGTAAAACGGGTGTTTTCATTGGGCTCATGAATCGTGATTACGAGGGGATTTCAAATAACATTGCCAAAAATATCACCCATTATAATGGGACAGGATCAGCAATGAGCATAGCAGCAAACAGGATTTCTTTTGCTTTCAACCTTACTGGACCATCATTGGCTATTGATACAGCATGTTCTTCATCACTTGTGGCTTTACATTATGCTGCTCAAGCCATCAAGCAAGGTGATTGTGAGATGGCAGTTTGCGGGGGAGCGAGCTGCATCATTGAACCAAGAATCAACGTGGCTCTGAGCAAGGCACAAATGATATCTCCAGATGGAATGAGCAAGCCATTTTCCATCAAAGCCAATGGATACGGCAGAGGAGAAGGTTGTGGAGTTTTGCTGCTCAAACCACTAGCAAAGGCTCAGAAAGATCATGACCATATTTGGGGTGTAATAGTCTGTAGTGCAATTAATCAAGATGGAAGAGCAGTCACGCCCATCACCAGACCTTCCCAGAAGCAGCAAGAAGAGTTATTGAGAAGTATTTATCTCAGAAATGTTGACCCATCACAGATTCAGTACATGGAGGCCCATGGAACCGGAACACCAGCTGGTGATCCGACTGAAGCAGCCAGCATATCAAATGTTATTGCACAATCTAGGCATTCAGATTTCCCTCCACTTACAATGGGTTCTGTCAAAGGAAACATTGGCCACACGGAGTCGGCTGCGGGAGCTGCAGGATTAATTAAAGTTCTCCTCATGATGCATCATGGAAAAATTGTATCATCCCTCCACTACTCAGAGGAGAACTCAAGCATCAATGCAAAAGCTTTGAATCTACATATTCCAACTGCTGTGAAAAACTGGGAAGAAAACGGGGAGAAAGAAAAGATGGCAGGAATCAACTCATTTGGATTTGGAGGGACAAATGCTCATGTAGTCATAAGGCAGTTGAAGCGAGAATCTGTTCCTAACTCTGTACAAAAACCACTAGAAATATTTGTGCTTTCTGCTGCCTCCCAGAATTCAGTTAGAATGATGATAAAGGACACAAGCAACCAAATAAGGGAAAGCGAAGACCTAATTCTCCAGAACCTGGCATATACATCTGCTTGTAGAAGAAGCCATAAGAATTACAGATACAGGAAAGCATTTAAAGCTTCTTCCCTTGAGCATCTCCAACAGCAGCTTAGATCAGCTGCAGATACTGAAGTGGCTCAGATCAAGTCTGATGTAAACGTGATATTTGTGTTTTGCGGTAATGGTGTTTTATATCAAGGAATGTGCAAACAACTTTTACAAATAGAACCAAGGTTCAGAACACAGATTGAGGAGATAGAAAAAATACTCCAACAATACACAGACATCAACTTAATACATTTAATTGAGAATGACTGCGATAACCTTACAAAACCAGACATAGCACAGCCACTGCTTTTTGTCATTCAGGTAGCAGTCGTGAATCTTTTGAAGTTCTGGGGTATTCAGCCTGACATTATCATTGGCCACTCAGTTGGGGAAGTTGCTGCTGTATATTGTGCTGGGATACTTTCACTCCAAGATGCTGTCAAGGTGCTTTACCACAGAAGTGCATTGCAATCAACGGTAACAGGAGGGAAAATGCTGGTCGTTAGTAATTTACCTGTGTCAAAAGTGTCAGACAAACTCGATTCATATTCAGGGAGACTCTGCATTGCTGCATTCAATAGTCCCTCATCATGTACAGTTTCAGGTGACGATAATGCTATTGACAAATTGCGCACAGATTTGCACAGTTCATTTGGAGATAAAAATGTATTCCTTCACATTTTGGATGTGCCTGCAGCATATCATAGTCACTTGATGGAACCTATCCTAAACGAAGTGGAAGAGAGGATTGGTAAATTACAGAAACATGAAACAAAAATTAAAGTAATTTCCACTGTCACTGGACAATTGGTTTCAGGAAATGATTGTGTGACAGGGACGTATTGGTCTAGAAATATTGAAAATCCTGTTCTTTTTGAACAAGCTGTTAGAACCGCTGTTGCAGAGGTTAAAAATGCAGTGTTTATTGAAATTGGACCAAGAAGGGCCTTACAAAGGTACATTAAAGAAATTGTAGGAAATGAGACTCAGGTTTTCCCTGCAATGCAGCCAGAAAGAGATTATGAAACTATGCTTTCAGTTTTATCAGGGGTGTTTGAAATGGGTTACAATCCTAATTGGCAAAACATCTTCAGAGAACACAAGGGTGTTCCAACATTGTGTCCATGTTATAAGTTTGACCACACTCAGCTTAACATCAATTTTGAAGATTTTAGGCAAGGTAATGAGAATGCATCATCTGTAACACATCCACTTCTTAGCAGTTCAAACAAAGATGGCAAGGAGTACAATTACAACCTAACACTAACAACCGCCCCATACCTGCTGGAGCACAAAAACAATGAAGTACCTATATTACCTGGTTCTATGTATGTTGAACTTGCATTAGCATCTGCCTTGGCAAGCATTAAACCAAAGGTACCTCTCGGGTTCTGCCAAATGAATATTACTTTCTTGAATCCTTGCATTGTACAGCCAAACTCGACTGAACTAAAGGTCAAAATTAACAGTAAAGATAAAATAACTGAATTTACTGTTATGGCAGCAACTGTTTCTTATGCAAAAGGAGAGGTTTGTCAAAATATGGAATGCATTGTGGAAGAAAATATTATTTCCCTTGAACATGTTTTGCAAAGAGCCAATGAAAGCATAAAGGCAGAAGTTATCTATGAAACAATCGCATCTTTAGGCTTCCAGTATGCTTCAGTCTTCAGAAACCTCAGAGAAGTGTTCTATTCACATGAACTCAAGGAAGCTATAACATATATCAAGGTACCAGATGAACTTGTAATGCAGATGCATGAATACTGCATTCATCCAGTTATTTTAGATTACTACATGCAAATGTGTGCTGTTCTGGCAATGCAAATGTCAAACCTGAGACCAGGGTTCCCAACTTCCATCGGGAGTTTGATAGTATGTCAACCAATGCAGCAGGAAATGATGTTATACGTAAGGACTTATAAAAATACTGCAGAATATTTTGAGGTCTCTGGGGCATTTACAGATACAAAGGGCATAGTCATTGCAGAGTTAAAAAATGTCAGAATTACGTTTCTTGGTCAAGACAATTCTACAGAATTCAATAATTTCTCCTTTGAAAATACTTGGGAGGAAATCGATAACCTTGCCAAAGATAGTCCTTCTGCACCTAAAGCATTGGTATTTGCAGATAACGTTGGAGTTGCCAAAGTTCTGCAAAGGCACTTGCATAGGCAGTCCTCATATATTCCTTATCAGGATCCATCCACCTTGATGGACAGAGAAGTTGCACAGATTCTACGACAGCACAATGTGACAGATTTGACCTACTTCGATGAAGTGTTGTTCTTATGGGGAATGAAAAACCTAACTGGCCATAATAGCGAAGTAGTGGTGAATCACATCAGCGGCTGCTGTGAGGTTTATCGACAAATCCTGCAACTGGTTCAAGGGGGAAAATCCTCAAAATCTGTCAGAATAGTCACCTTTCGGACATCAGAAAAAGCAGTGGATCAAATCACTGCAGGTTTTGCCTTGTGGGGAATGACCAGATCGTGTCTTCTAGAGCTTCAAGAGGTTTCTCTTCAGCTGATTGACATTGGCTCTACCAGTGAGATGGATATTACAGCATTAGCTCACACAATCAGCCTGCCTCATAATTACCCTGAAGTAATGATTCAATTCGGAAAGATCCATATTTCACGAGTCAGACGAGCAGCCAATATAAGTTCCAACGGTATTCACAACATGGCACCTTATTCTGGTTGTGGAGATATTATTTTCCAGACAATGAATCCCTACAAAGTTGTAGATTTCCATGCAAAGCCACAAGAAAGAAGATTGAATGAACCTACAAACCAAACAGTGCATGTTAAAATCGATGCAATGTGCATTCATTCTTCAGATTACTTTCCAGTCAGTGTCTCTGCTGTGAAATTTGGACAGACACTGTATTGGAACACAACCAACACTCAAGGACATGAGCTAATTGCTGTAGACTTCAGTGGTACAATCACATCAGTTAGCAATGATGTAAAATCCTGTAATGTAGGAGATCATGTTGTTGTATGCTATCCCGTTGCTGCACATTCGACCGTCAGTCTCCCTGCATCCGTGTGTTTCAAAAGCAGCAACATTCCACTACTAAAGCAAACGCCCTGCGTTTCATACTTTACAATTGCCTGGGAAATACTCTGTAACATTTTGCCTCAAGTTAAACATCACAAATATTTGGCAATTCATTCCTCAGCACCAGAATCTTGCTTCAGGAAAGTGCTGTCCCTAGCAGCTACTTCAGTGGGCTGGCAAGTACAGGTTCAATCAGAGCTTAATGACTTTCCACAAGCTTTTCTTAGTTCTGATGCATTGCTTTTCCTGCCACCCATTAAAACAAGCCTCATCAAGAAGATTGTTAACAATTGTTCTGCTAAGCATGTTATTGTTCTCGTTGATAACAGCCAAGTATTTGAAATTTCTCAGAACATGCTTGGTTACGAAAAGGATAATGTTCAAATTCACTTTTTGCAGGTAGCCAACATACTTAAAACGTGGTATCTTAAAAAATCGGCAGACAGTGTTTACAAGTGGATGAAATCATTGCGCTTAAAGAGCAAGCAGCATGATTTTCCAAGGATTAACTTTCACTCACTGATGTCTGATATGGATGAATGTAGGAAAGAGTCCTACCTCACTAGTGAAGCTGTCTCAGTTGTGGATCTGAATGCAAATGCATTAAATAGTAAGATTTCAGAGATACCAGTGTACAACTGTCAAAAACAACTATTTAGTAGAGATGCTGCTTATATAGTTACAGGGGGACTTTCAGGGCTTGGCTTGCAGACAGTACATTTTATTGCTGAACATGGTGGAGGAGTTGTCATTGTTCTGTCAAGACGCTCCCCATGTACCGAGAAGAAAGAAGAATTCAAAAATATTTGGAACCAGTTTGGGACAACTGTAGTCAGTGTTCCCTGTGACATCTCAAAACAGTCAAATGTTGAGTTGGCGATCAATCAGTTTTGTTACTCCTTCCCAAAGATTCCAATTAAAGGAGTGTTTCACAGTGCCGTTGTATTACACGATGCCCTTCTTCAAAGTCTAAATAGGTCCTTATTTGATAAGGTTTTAGCTCCCAAAATTGCAGGAGTTCTGAATCTTCACAATACAACAAAATCCTTCCAATTGGACTATTTTGTGTGCTACTCGTCAATTGCATCATTCATTGGGAATCCTGCCCAAGCAAACTACTCTGCAGCAAACTCTTTTCTTGATTTCTTTGTGCATTACAGGAGAAATCACGGACTAGCAGGGCAGTCTATAAACTGGGGTGCACTCAATCTTGGACTATTACTCAACAAGGTTGACATCCAAAGATTTCTGGAATCAAACGGAATAATGATTTTGGAAATTTCGGAAATTAAAAAATGTCTTGAGCAAACCCTGGAACTAAACAATCCGCAGCAAGCTATCTGTAAATTTAATTTCTCCACTTTATACCATAATGTAGTTTCTCAGAACCCTGCAATCAGAGCACGAATTGGTTCACTTGTGGAACATGAAAACAATAAAGCACATATTAGTCCAAAGCATGTTTTATCCACTAATTCACCAATGATCCCTGAGCAGTATATCATTGCATTGTTGAGTGAAGTCAGCGATGCTGATCCTACAAAGTTTACAAAAGAAACTTACCTGTCCAGCTTTGGCCTTGATTCCATGCTGAGTATGACGGTGCAAAATCGTATTTATCTGGAAATAAATATTAATTTGCCACTCGTGACATTTCTGGATCCAAATACAACAGTAGGTACTGTAGTGTCACTGCTTGAAAAGCAAAACCCTGTACAGCCACAAGTTAGCGAAACAAATCTGCTACAGTACCAATCTTTGACTGCTGAGTCTGATGAAAACACTGTATTCTAA

Transcript

Protein

XP_032872027.1

MEKNGEDIAIIGIGCNFPGGEGIDNFWKVLLQGRNCVVDIPPNRFDTTFWYNSDGNKAGKMITKRASLIEGFNEFDHNLFDIRQIEANSMDPQHKLLLECTYKVFENAGIPMEEISGSKTGVFIGLMNRDYEGISNNIAKNITHYNGTGSAMSIAANRISFAFNLTGPSLAIDTACSSSLVALHYAAQAIKQGDCEMAVCGGASCIIEPRINVALSKAQMISPDGMSKPFSIKANGYGRGEGCGVLLLKPLAKAQKDHDHIWGVIVCSAINQDGRAVTPITRPSQKQQEELLRSIYLRNVDPSQIQYMEAHGTGTPAGDPTEAASISNVIAQSRHSDFPPLTMGSVKGNIGHTESAAGAAGLIKVLLMMHHGKIVSSLHYSEENSSINAKALNLHIPTAVKNWEENGEKEKMAGINSFGFGGTNAHVVIRQLKRESVPNSVQKPLEIFVLSAASQNSVRMMIKDTSNQIRESEDLILQNLAYTSACRRSHKNYRYRKAFKASSLEHLQQQLRSAADTEVAQIKSDVNVIFVFCGNGVLYQGMCKQLLQIEPRFRTQIEEIEKILQQYTDINLIHLIENDCDNLTKPDIAQPLLFVIQVAVVNLLKFWGIQPDIIIGHSVGEVAAVYCAGILSLQDAVKVLYHRSALQSTVTGGKMLVVSNLPVSKVSDKLDSYSGRLCIAAFNSPSSCTVSGDDNAIDKLRTDLHSSFGDKNVFLHILDVPAAYHSHLMEPILNEVEERIGKLQKHETKIKVISTVTGQLVSGNDCVTGTYWSRNIENPVLFEQAVRTAVAEVKNAVFIEIGPRRALQRYIKEIVGNETQVFPAMQPERDYETMLSVLSGVFEMGYNPNWQNIFREHKGVPTLCPCYKFDHTQLNINFEDFRQGNENASSVTHPLLSSSNKDGKEYNYNLTLTTAPYLLEHKNNEVPILPGSMYVELALASALASIKPKVPLGFCQMNITFLNPCIVQPNSTELKVKINSKDKITEFTVMAATVSYAKGEVCQNMECIVEENIISLEHVLQRANESIKAEVIYETIASLGFQYASVFRNLREVFYSHELKEAITYIKVPDELVMQMHEYCIHPVILDYYMQMCAVLAMQMSNLRPGFPTSIGSLIVCQPMQQEMMLYVRTYKNTAEYFEVSGAFTDTKGIVIAELKNVRITFLGQDNSTEFNNFSFENTWEEIDNLAKDSPSAPKALVFADNVGVAKVLQRHLHRQSSYIPYQDPSTLMDREVAQILRQHNVTDLTYFDEVLFLWGMKNLTGHNSEVVVNHISGCCEVYRQILQLVQGGKSSKSVRIVTFRTSEKAVDQITAGFALWGMTRSCLLELQEVSLQLIDIGSTSEMDITALAHTISLPHNYPEVMIQFGKIHISRVRRAANISSNGIHNMAPYSGCGDIIFQTMNPYKVVDFHAKPQERRLNEPTNQTVHVKIDAMCIHSSDYFPVSVSAVKFGQTLYWNTTNTQGHELIAVDFSGTITSVSNDVKSCNVGDHVVVCYPVAAHSTVSLPASVCFKSSNIPLLKQTPCVSYFTIAWEILCNILPQVKHHKYLAIHSSAPESCFRKVLSLAATSVGWQVQVQSELNDFPQAFLSSDALLFLPPIKTSLIKKIVNNCSAKHVIVLVDNSQVFEISQNMLGYEKDNVQIHFLQVANILKTWYLKKSADSVYKWMKSLRLKSKQHDFPRINFHSLMSDMDECRKESYLTSEAVSVVDLNANALNSKISEIPVYNCQKQLFSRDAAYIVTGGLSGLGLQTVHFIAEHGGGVVIVLSRRSPCTEKKEEFKNIWNQFGTTVVSVPCDISKQSNVELAINQFCYSFPKIPIKGVFHSAVVLHDALLQSLNRSLFDKVLAPKIAGVLNLHNTTKSFQLDYFVCYSSIASFIGNPAQANYSAANSFLDFFVHYRRNHGLAGQSINWGALNLGLLLNKVDIQRFLESNGIMILEISEIKKCLEQTLELNNPQQAICKFNFSTLYHNVVSQNPAIRARIGSLVEHENNKAHISPKHVLSTNSPMIPEQYIIALLSEVSDADPTKFTKETYLSSFGLDSMLSMTVQNRIYLEININLPLVTFLDPNTTVGTVVSLLEKQNPVQPQVSETNLLQYQSLTAESDENTVF

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00109	ketoacyl-synt	Beta-ketoacyl synthase, N-terminal domain	Domain	Interproscan
PF00550	PP-binding	Phosphopantetheine attachment site	Domain	Interproscan
PF00698	Acyl_transf_1	Acyl transferase domain	Domain	Interproscan
PF02801	Ketoacyl-synt_C	Beta-ketoacyl synthase, C-terminal domain	Domain	Interproscan
PF08659	KR	KR domain	Family	Interproscan
PF14765	PS-DH	Polyketide synthase dehydratase N-terminal domain	Domain	Interproscan
PF16197	KAsynt_C_assoc	Ketoacyl-synthetase C-terminal extension	Family	Interproscan
PF21089	PKS_DH_N	Polyketide synthase dehydratase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001227	Homologous_superfamily	Acyl transferase domain superfamily	Interproscan
IPR009081	Domain	Phosphopantetheine binding ACP domain	Interproscan
IPR011032	Homologous_superfamily	GroES-like superfamily	Interproscan
IPR013968	Domain	Polyketide synthase, ketoreductase domain	Interproscan
IPR014030	Domain	Beta-ketoacyl synthase, N-terminal	Interproscan
IPR014031	Domain	Beta-ketoacyl synthase, C-terminal	Interproscan
IPR014043	Domain	Acyl transferase	Interproscan
IPR016035	Homologous_superfamily	Acyl transferase/acyl hydrolase/lysophospholipase	Interproscan
IPR016036	Homologous_superfamily	Malonyl-CoA ACP transacylase, ACP-binding	Interproscan
IPR016039	Homologous_superfamily	Thiolase-like	Interproscan
IPR018201	Active_site	Beta-ketoacyl synthase, active site	Interproscan
IPR020841	Domain	Polyketide synthase, beta-ketoacyl synthase domain	Interproscan
IPR032821	Domain	Polyketide synthase, C-terminal extension	Interproscan
IPR036291	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR036736	Homologous_superfamily	ACP-like superfamily	Interproscan
IPR042104	Homologous_superfamily	Polyketide synthase, dehydratase domain superfamily	Interproscan
IPR049551	Domain	Polyketide synthase, dehydratase domain, C-terminal	Interproscan
IPR049552	Domain	Polyketide synthase, dehydratase domain, N-terminal	Interproscan
IPR049900	Domain	Polyketide/metazoan fatty acid synthase, dehydratase domain	Interproscan
IPR050091	Family	Polyketide and Nonribosomal Peptide Biosynthesis Enzymes	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43775	FATTY ACID SYNTHASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004312	Molecular Function	fatty acid synthase activity	Interproscan
GO:0004315	Molecular Function	3-oxoacyl-[acyl-carrier-protein] synthase activity	Interproscan
GO:0006633	Biological Process	fatty acid biosynthetic process	Interproscan
GO:0016740	Molecular Function	transferase activity	Interproscan
GO:0016746	Molecular Function	acyltransferase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-