Gene detail

Detailed information of XP_032868193.1 in Amblyraja radiata Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
XP_032868193.1	KN MOTIF AND ANKYRIN REPEAT DOMAIN-CONTAINING	NC_045990.1	9125958	9179505	-

Gene Structure

More details in Jbrowse Sequence

CDS

XP_032868193.1

ATGGCGGAGGTGCTGCAGATGAAGACCAACTTCTCCGGTAGTGCCGAGCTCGCCGCTGGCACGGAGGCCAAGGGAGGCGACCCCAACCAGCCGTACTCGGTGGAGACGCCGTACGGCTTCCACCTAGACTTGGACTTTGTGAAGTACGTGGACGACATCGAGAAGGGCAACACCATCAAGAAGGTCCACATCCACCGGCGGCCACGGGGCTGCAGCTACACCGGCTCGTGGTGGACCTCCACCGAGTCCCTCTGCTCCAACGTCAGCGGCGACAGTCGGCACTCCTCCTACTCCTCCTGCGGCCGCGGCAACTACACGCCCGGCTGCGGCTACGGCTATGGCTACGGCCGCGGCCCGCCAGTGCCGCCCACCGCCTACAGTTCCCGCGTGGAGAAGACCCTGCTGGAGACGCGCAGGCGGCTGGAAGAGGAGCCACTGGCGGGCGGTGACGGGAGGAGACCACGTTACTCCAGCCTCAGCAGCCTACACGGATCCACCAGCTCCCTGTCCGGCGTTGGTCAATCCTGGTCCAGGTTGTCCAACGCCCCCCACAACGGCTCCCAGAGCTCCGCCCAGGGCCAGTTCACCCCCCTGAGCTCCGGGCTGGCCACCCCCTCCACCCCCAGCTCCGGACACCTCCACAACATCCGTGAGCAGATGGCAGCCGCCCTGCGCCGTCTACGTGAGTTGGAGGATCAGGTGAAGATGGTGCCTGTCCTGCAGGTGAAGATCTCTGTGCTGCAGGAGGAGAAGAGGCAGCTGAGTGTCCAGCTGAAGAGCCAGAAGTTCCTGGGGCACATGGATGGTTGGGGGGCGCAGAGAGCCAGCAAGCCCAGAGGGGAGCTGTTCATCGACATGCCCGAGGAGGAGGAGGACCATCGGCTGGGACAATCAGAGGGAGGGTCTCTCCTCTCCCCGGCCCTGAGGAAGCTGACCCAGGGGGGTCCGGCCAACAGGACACCCCCCACCCTCAGGAGCGTTGGCATCTGGGTGAGGGAGACGGACCTGGGCATCACCCCGTCCAGCCTGCAGAGAGAGGCGGACCACCACCGCCACCTCTCGCAGCTCCTGGCCAGGAAGATCTCTGGGCTGGAGCGGAGGCTGCGGGAGGCCGGGCTGGAGCTGGAGGCCGCACAGTGTCCGGGGAGGAAGGAGACGGCGGACAAGGGGGGCCCCTGCCCTGCCCAGTCACCCGAGGGTGGCACGGCCGGGCAGGAAGGGAGGGTGGGGGAGCCACCGTTGCCACCACCCCGGGGTGACTCCACCCCCCGGCCCCGACCCGCCACCGTGACGGGGCCCCCGTACGGCGGAGACGCTGGGACCACCCCGGAGGAGGGGCCCTTCAAGGAGGTGCCGGCCAAGCTGGTGAGCTGCACCATCGTGACCACTCTGGCCTCCACCTGCGAGGAGCTGCCCTCCCTGATGACCAGCGCCATCACCGCGAGGCCCCACCGGCCTGGGCCCAGCCCCGCTCTCTTGCGGCAAGCCGTGCGGCAGCTCACATGCGATGCCCATGGGGACAACGAGGCTGGGGCTCCAGTGCCACCCCCTCGGGCCCCTGAGGTGCCTCGGGCGCTCTCGGCCTCCGGCGCGGAGACGGTGCACGAACTGGGCGCCTTAAGGCCAGGCCCGGCCCAGCACCAACACCCATCGGAGGGCAGTCGGCATCTGGTGAGACTGAGGGAGCCAGACCCATCCTCAGATGACTCCACAAGGCCAGTTTCGCCACATGGAGCGCAGCTGAAGTCCATCATGAAAAAGAAGGAGAATGGAGCGGTTCCCGACAGCCCTCCTACGAAGAAGAGCCTGCAGTTCATCGGGGTCAATGGCGGGTACGAGTCGACGTCTTCGGAAGAGTCCGGTACTGAGAGTGGGCCGAGTGAGTCGGAGGGGGAGAGTACGGAGAGTGATTATCACGAGGCCAGCGAGAGACTGCCGGGAGAGCAGGTGGAGAGAGCAGGGACCGAGACGCCTGTGGCAGGCTCAGCGCCAGAGACCCAGAGCCCGCCGCCCGTCCCAGCCGAGCCTCAGCGGGAAGCCAGGAGCTCGGGGAAGCCTCCGGAGACGGAGAGCGTGTGGGAATCAGCGGAGCAGAGCAGGAGCATGTCTGAAGGAGAGAAGCAAGTGCGGATTGTCACGGGTGGGGAACTTGTGAAGGAGGTGGTGGTGGTGCCAGGAGGTGAAACAGAGGCAAGAGTCACGTCGGGGCCAAACCAGCCAGAAACCATCGCTCAGCCTGAAATACTGAGCCCGCAGCAGAAAACAGACAGCTGCACGTTTGAGCTGACGGAGGGCTTGGTCTCGGCATGTGTAACTCTGCAGAAACACCTGAATGATCCAGACGGCTTCACGAACAAAGACGTGAGGTTGAGCTACCTCACGGTGCAGCAGGAGTGGCTGCTGGTGTCCAGCCCCAAGGCAGCAGATGTGGAGATGGTGCGGCGATACCTGGCCGTGTTCAAGGCGATGTCCCCAAACCTCTTGGAGCTGATCGTCAACATGGCCGACGGCAACGGGAACACCACGCTCCACTACACCGTCTCACACTCCAACTTTCCCATTGTCAAGCTCCTGCTGGACACAGGTGCCTGTAACCTGGACAAGCAGAACAAAGCGGGTTACACCGCCATCATGTTGGCATCGCTCGCTGCCCTGCAGACCGACAGCGACATGCAGACCGTCATGCAACTCTTCTGCCTGGGTAACGTCAACGCCAAGGCCAGCCAGGCGGGTCAGACGGCGCTGATGCTGGCGGTCAGCCACGGCCGCACGGAGATGGTGAAGGCCCTGCTGGCGTGTGGGGCGGATGCCAGGGTCCAGGACGACGATGGCTCGACAGCACTGATGTGTGCTTGTGAACACGGCCACAGCGAGATCGTCGCGCTCCTGCTCGCCACGCCCGCCTGCAACGTAACACTGGCAGACAATGACGGGAGCACAGCGCTCTCCATTGCGGTGGAATCCGGACAGAAAGATATCGCTGCCTTGCTCCACAAACATCTGAATCAGACAGCGGCTTCAAGCCCCTCCACTGGCACTACCACCCCCGCCCAGCCTGCCACTCACCCCTGCCTACCTGAAGCCCAGGTGTAG

Transcript

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12075	KN_motif	KN motif	Motif	Interproscan
PF12796	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002110	Repeat	Ankyrin repeat	Interproscan
IPR021939	Conserved_site	Kank N-terminal motif	Interproscan
IPR036770	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR047184	Family	KN motif and ankyrin repeat domain-containing protein 1-4	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24168	KN MOTIF AND ANKYRIN REPEAT DOMAIN-CONTAINING	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000122	Biological Process	negative regulation of transcription by RNA polymerase II	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0008285	Biological Process	negative regulation of cell population proliferation	Interproscan
GO:0030837	Biological Process	negative regulation of actin filament polymerization	Interproscan
GO:0033147	Biological Process	negative regulation of intracellular estrogen receptor signaling pathway	Interproscan
GO:0070563	Biological Process	negative regulation of vitamin D receptor signaling pathway	Interproscan
GO:2000134	Biological Process	negative regulation of G1/S transition of mitotic cell cycle	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-