Gene detail

Detailed information of XP_032868124.1 in Amblyraja radiata Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
XP_032868124.1	CATION-TRANSPORTING ATPASE-RELATED	NC_045990.1	10533350	10593720	+

Gene Structure

More details in Jbrowse Sequence

CDS

XP_032868124.1

ATGCCGGTCGCTGTGCAGCGTCACCGCGGCGGGCCTGGTGCTCCGAGTCCGGCCATGAAGGCGGTGCAGGAGGACACGGAGCCGCTGCTGGGGCCGAGGAGAGCGGGCGGCCTCCACGAGGAGCTGGTGGAGAGCGTGTCGCTGTACCGCCGCCGGCCCTTGCCGCTGTACGGCACGCTGGGGCCTTTCGCCGCGCTCTACGCCGCCTGGCTCTACCTGTGGGTCGGCCACTACGGGGTCAGCCAGTACCCGGAGGCGGGCCTCATCGCTCTCGCCGCGCTCGCCATCCTGCACATCCTCACCGTGCTGTCGGGGCACTGGTCTGTGCACGCTCATTGCCTGCTCACTTGCACCGCGGAACCAAACCCTTTCAAGGCCACTTATGCGAAGGTTGTTCCTACCGCTAACAATGGGTCCCCTGAATTGGTGCTGCTTCTACATGACCAGGACACGATTCAACAGAAAACCATCTATTTTGAGTTTCAAAAGATTAAATACTGGTTTGATGAAGATGAGAATGAGTTCCTCCCTGTCGCTTTCCCAGTAGATTTTCAAATTAATTTTTACCAGACTGCCAAAGGATTCCAGGATGAAATAGAACTCAAAGATGCCGAAAAGAAATATGGTATAAACAAGGCTGAAATGATAGTTCCTGAATTCATGCAACTCTTCAAAGAGCGTGCCATTGCTCCTTTCTTTGTTTTTCAGGTGTTCTGCGTGGGTCTGTGGTGCTTGGATGAATACTGGTATTACAGTGTCTTTACCCTTTTCATGCTGGTAGCCTTCGAAGCCTCCTTAGTGCAGCAACAAATGAGGAACATGTCAGAGATCCGGAAAATGGGAAACAAGCCCTTCATGATCCAGGTCTACAGGAATAGGAAATGGAGGCAAATCTCAAGTGAAGAGATTATTCCCGGTGACATTGTTTCAATAGGTCGGTCACCTCATGAGAATCTGGTCCCTTGCGATGTTCTGTTGCTCAGAGGGCGATGTATTGTAGATGAAGCTATGCTAACAGGAGAGTCTGTTCCACAGATGAAGGAACCAGTGGAGGACGTTCCTCCAAATCAGACACTGGACTTGCAATCAGATTCAAAGCTGCATGTAATATTCGGGGGAACCAAGGTCGTTCAACATACTCCACCCCAAAAATCTATTGCGGGACTCAAACCTGTGGATAATGGGTGTGCTGCCTATGTACTGAGGACTGGCTTTAACACGTCTCAAGGCAAACTGCTGCGAACAGTCCTATTTGGAGTCAAACGGGTTACTGCCAATAATCTGGAGACATTTATCTTCATACTTTTCCTTCTCATCTTTGCTATTGCTGCAGCGGTATACGTTTGGGTAGAAGGTACAAAGGACCCAAACAGAAACCGTTACAAGCTGTTTTTGGAGTGTACGCTAATCCTAACATCTGTTGTTCCACCTGAGCTCCCAATTGAATTATCACTGGCTGTCAACACTTCACTTATTGCCTTAGCTAAACTCCATGTGTACTGTACAGAGCCTTTCCGGATCCCCTTCGCCGGGAAAGTGGAATTCTGCTGCTTCGATAAAACAGGCACTCTGACAAGTGATAACCTGGTGGTCAGAGGGGTTGCCGGACTCCGAGAGGGCAAGGAATTGGTTCCCGTCTCGGACATTCCCCTACAGACACACCGGGTGGTGGCGACGTGCCACTCACTGGTACAGATGGATGACGGCACATTGGTTGGTGATCCCCTTGAAAAGGCAATGCTCACAGCTGTTGACTGGACACTCACAAAAGATGAGAAGGTTTTCCCTAAAAGTATCAAATCACAAGGTCTGAAAATCCACCAGCGCTTTCATTTTGCCAGTGCGTTGAAACGCATGTCAGTCTTGGGCTCCTACGAGACGATGGGCTCCACGGACCTCCAGTACTTCAGCACAGTGAAGGGGGCACCTGAGACGTTGCGTAGCATGTTCTCGGAGCGTCCAAGTAATTATGATTCTGTCCACACGGAGATGTCACGAGAGGGAGCAAGAGTATTAGCCTTGGGGTATAAAGAGATGGGATACCTCACTCATCAGCAGGTTCGCGAAATAGCCCGTGAGGATTTGGAAACGAACCTGAAATTTGCAGGCTTCATGGTAGTCTCTTGTCCCCTCAAGAGTGATTCAAAAGCTGTCATTAAAGAGATCCAGAATGCATCGCATCAGATGGTTATGATCACTGGTGATAACCCGCTAACAGCCTGCCACGTGGCCCGTGAACTCTCCTTCCTACAGAAAGTGCACACACTCGTCCTCCAGGCACCACACGACAAAGGAGCTGAATGGAATTGGAGGTCAATTGACGGCACAATTCTTGTTCCCATGATTTTACCGACTGGTGAGCTGACCAAAGATTACGACCTGTGTATGACTGGAGAAGGTCTTAATCACTTAAGCACAACGAACAAACCATTCCTGATGAAGCTTATGCCTCACATCAAGGTGTTTGCCCGGGTTGCACCGAAACAGAAGGAGTTTGTAATTACCAGTTTTAAGAGCCTGGGTTACACCACCTTGATGTGTGGCGATGGAACTAATGACGTCGGAGCCTTGAAGCATGCTGATGTTGGAGTGGCCTTGCTGGCCAACACACCCGAGCGAATTCCGGACAAGAAAAAGAAGACAAAAGAGGGGATAAACGATGCAAAGTCGGTGGCTTCCAATGCAGGCGGCAACATGAAGTTAAGCTCGCGAGCAGCAAGGCACCGGTTCATGTCACAGCGGGAGGAACAGCTTGCCCTGCACCGGGAGCGTCTCAACCAGGTGCTGAAGGACCTGGAGGAGGACCAGATGCCTGTAATTAAACTGGGAGATGCCAGCATTGCAGCGCCATTTACTTCCAAGCTGTCATCCATCATGTGCATATGCTATGTGATAAAGCAGGGACGGTGCACATTGGTAACTACTCTGCAGATGTTCAAGATCCTGGCATTGAACGCCCTGATACTCGCTTACAGCCAGAGCGTTCTGTACCTGGAAGGGGTTAAATTCAGTGACTTTCAGGCGACTCTGCAGGGACTCCTTTTGGCTGGTTGTTTCCTCTTCATCTCTCGATCCAAGCCATTGAAGTCTCTGTCCAAGGTGCGACCACTGCCAAACATATTCAACCTGTACACCATCCTCACGGTCCTGCTGCAGTTTGCTGTCCACTTCATCAGCTTAGTTTATTTGTACAAGACCGCACAGAAACATTCTTCCTCCAGGAAGGACGAATTTGCGGATCTGTACAAAGACTTTGAGCCGAGCCTGGTGAACAGTACTGTCTACATCATGTCCATGGCTATGCAGATGGCCACTTTTGCCATCAACTACAAGGGTCACCCGTTCATGGAGAGCCTGAGGGAGAACAAGCCTTTGCTGTGGAGTATTGTTATCTCTGGCCTCGCCATTGTGGGCCTGCTCACTGGCTCCTCGCCAGAGTTCAACCAACAGTTCGGGCTGGTGGATATCCCGATGGAGCTGAAGATGGTGATTGCGGGAGTGCTGGTGGTCGACTTCCTGGTGGCACTGGGGATCGACCGAACGCTGCAGGCGTTGCTGGGCAACAGCAGATGCCGCGTGCCTTCCTGA

Transcript

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00122	E1-E2_ATPase	E1-E2 ATPase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001757	Family	P-type ATPase	Interproscan
IPR006544	Family	P-type ATPase, subfamily V	Interproscan
IPR008250	Homologous_superfamily	P-type ATPase, A domain superfamily	Interproscan
IPR018303	PTM	P-type ATPase, phosphorylation site	Interproscan
IPR023214	Homologous_superfamily	HAD superfamily	Interproscan
IPR023298	Homologous_superfamily	P-type ATPase, transmembrane domain superfamily	Interproscan
IPR023299	Homologous_superfamily	P-type ATPase, cytoplasmic domain N	Interproscan
IPR036412	Homologous_superfamily	HAD-like superfamily	Interproscan
IPR044492	Domain	P-type ATPase, haloacid dehalogenase domain	Interproscan
IPR047820	Family	P5A-type ATPase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45630	CATION-TRANSPORTING ATPASE-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000166	Molecular Function	nucleotide binding	Interproscan
GO:0005215	Molecular Function	transporter activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006874	Biological Process	intracellular calcium ion homeostasis	Interproscan
GO:0015662	Molecular Function	P-type ion transporter activity	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0019829	Molecular Function	ATPase-coupled monoatomic cation transmembrane transporter activity	Interproscan
GO:0030176	Cellular Component	obsolete integral component of endoplasmic reticulum membrane	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan
GO:0140358	Molecular Function	P-type transmembrane transporter activity	Interproscan
GO:0140567	Molecular Function	membrane protein dislocase activity	Interproscan
GO:0140569	Biological Process	extraction of mislocalized protein from ER membrane	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-