Gene detail

Detailed information of XP_032868068.1 in Amblyraja radiata Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
XP_032868068.1	OS02G0815200 PROTEIN	NC_045990.1	3828683	3850267	-

Gene Structure

More details in Jbrowse Sequence

CDS

XP_032868068.1

ATGGCGGCGACCGTTACTCCGCCGGCGAGCGAGTTGAGGGAAAAGAATGAAAATAAGGAAAGTAACCGCGGGGAAGAAGCGGAGCAGGAAGAGGAAGACTTCTCGGATGATGATCAGTGGTCTAACCCGGGTCTGGGGTCCGACGGGGGGAGGTCGGACCTGTTGGAAGACGACGAGGCCGCGTCGCATCCGCGGACTCCCGAGGAGACGCTGGCCGAGCTGGAGGCCGAGGAGAGGGAGCAGCGGCTGGAGCGGAGCCGCCGCGAGTTCCGCAACCGGCGCAAGATCATCATCAGGAACCTGCCGCTGGACATCATTACCCAGGAAGTCTATGAATTGCTGAGTGAGTATGATCTAAAATACTGCTTCGTGGACAAGTACAAAGGCACAGCCTTTGTCACGCTCTTAAACAGGGACCAAGCAAACTCTGCCATTGAGAAACTTCACCAGTCCACATTGCGAGACCGAGAGATTTCAGTCCAGCTGCAGCCTACCGATGCTCTGCTGTGCATTGCAAATCTGCCACGCTCCTTCACTCAGCAGCAATTTGAGGAGCTAGTGCGGCCTTTTGGGAACCTGGAACGATGCTTTCTTGTGTACAGCGAGGTCTCTGGACACTCTAAAGGCTATGGTTTTGTGGAATACATGAAGAAGGACTCTGCTGCCCGTGCTAAATCGGAGCTGCTGGGAAAGCAGATGGGTACGCGAACCCTCTATGTTCACTGGACAGATGTGAACCAACTAACTTTTGATCTCACGCATTCTAAGTGCCTGTGTGTAGACAAACTACCACATGATTACAAAGACCTGGAGGGACTCAGTCAAAACTTCAGCAGTCTCCATCAACCAACCTACTGTCAGCTTGCTCAAGGCACCGATGGGCAATTTCGAGGTTTTGCTGTTGTGGAATATGAAACTGCAGACAAAGCAGAGGATGTGCAGCAAGAGATGGATGGCATATGGGTTGGCGGCAACCACATTCGGGTGTCATTTTGTGCACCTGGGCCCCCGGGACGGAGCATGCTTCCTGCCCTGATAGCAGCTCAAGCTATGGCAATGAACCGTGGGAAAGGTCTTCTCCCGGAGCCTAATCCCGTGCAGATTCTGAACAGCCTCAATAATCCAGCAACACTGCAGCTCCTCTTAAACCCATTAATCCATGGAGGAGCTGGTGGGCTGCAGGGACTTTTAGGAGTTGCTCCAACAATGCCACTTTTGGGGAATCCTGGTTTAAGTGCCGCCCTCCTGCAGTTGCTTTTACAGAGCCAAAATCCAGCACAAATCCAGAAGCTTGGGATTCTGGGTGAATCTCCTTTAGCAGCTTTACAACAAAACCCAGGACTTGGAGGACCACCACAACCAGGAAAAGGACTTCTTGGACTGAATTCTGAAAGGGGACATATGAATCCACCTATGATGCCAATGCCAAACCAACAATATCATGGACAAATGTCGGCAGATGCGATGGGCATGATGGAGAATCCATCTCACTCTCGGCAAGTCTCCTCACCTCCAGCTTCTCTGCAAGGAATCCCCACCTCCATCCTGGGTTCTGTCCTCAATGATTTGAAGAAACAAAGGAACCAGAATATGTCTCAAGAGGCTGGCTTGGCTACATCAGGGCCATCTCTGTTGGGAGAGCCACCAAAAGATCTGCGAATGCCTCAAAATCCATACCTCAATCTACGAAGTGTGTTCCCAACTAATCTGTCTGCCAACACCAGTAATTCAATGTCCTATGGGCACAGTACTGGTCTTCTGGGAAACTACCCAAGCTCCAGCCCCAGAATTCATCATGGATCTGGCATCGGTGATTATCCGGAGACTGGAGGCAGTCAGTCGAGTTACGGCAGCATGGAAAACTATGATAATTACAACCATTCTTACAGGGACTATGGGCAGGAAAGAGAAAGAGAAAGAGAAAGGGATATGGACCATTATACGCCATCAGGTGATCCGAGATATCGAGGATATCCTTCCCGTGACAGGAGTGAGGATAGAGAGCTGGAGAGATACTCAAGGTCCCGTGACCATGGCATGGGAGGCATGCGGAACTACGGACGTGATCATAGTGATGAAAGGGAGATGGAGCGATATCAACTTCCACTTGACTCTGGACTTGGAGGTTATGAATCTGACCAAAATCAGCGATCAACTCCATGTAGCTACAATGATTTGGAACCTGCTACACCTCAACTGTACTCCAGCTCGCCCACATCCTATTTCACTAGTGGCCTAAGAGCGGGACTCCGACAGGGCCCCTCCTCCCAGGTGAACCCACTGCTGAGCTCCGGGGCAGGCCTCTTGGGTGCTCGTCCCTCTAACTCCCCACCAGGCGCCCTGCTGAAGACTCCACTGATCGGTCACAAGCGGGGTGCCTCTCATCTGATCCCATCACCTGAGCCCAGCCCAGAGGGAGGTTACATCGGCCAGCACTCCCAGGGGCTGGGCGGCCACTACGCCGACTCTTACTTGAAGAGGAAGAGGATATTTTAG

Transcript

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00076	RRM_1	RNA recognition motif	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000504	Domain	RNA recognition motif domain	Interproscan
IPR012677	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan
IPR034635	Domain	Ribonucleoprotein PTB-binding 1, RNA recognition motif 3	Interproscan
IPR035979	Homologous_superfamily	RNA-binding domain superfamily	Interproscan
IPR050502	Family	Eukaryotic RNA-binding	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48025	OS02G0815200 PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0003729	Molecular Function	mRNA binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-