Gene detail

Detailed information of WZF240680 in Chaetoderma shenloong Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
WZF240680	VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATED	HiC_scaffold_1026	305973	345654	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

WZF240680.2

GCGGGATATACAGAACAAGTAACAAATAACGCCGGAAGTTTAGCTGTCAGCTCATTGAAACATTTTGTACACGTCCACAAATACGACTGAGACGATGTTTTGACGATCTTCTAGCTAAATACGAGAACCAGTGATATGGAGAACTTGTATCAACAAACCAATAAATTAATACACGATGTACAAGGTGATTTAGGAAAACTAGAGCGAGTGTCAGGAAACTCTGTCCACAACCATGTCCACATCGCTGAAAATGAAGTTCAAGCAAAAATTGACATTGTAGTGAGCAACTGTGAACGGCTGGACTTGTTGGTGAATAAAGAACCTATACAACGAAGATCAAATGCCAAATTACGAGTAGATCAGCTTAAATCTGATTGCCAACATTTACAAGCAGCAGTTCGGAATCTACAACACAGAAGATACATGCGAGAAGAAGAGGAGAGGGAACGAGAGGCGCTACTTTCACAGAAATTTGCTCCAAATGACCAAAATTTCTCTGTAATGATTGACGCTGATCTACAGCATAACACACACCTGAACAGCGCTCATCGTGGCATGGATGACTTGCTGGGGTCGGGCACGAGTATTCTATCTAACCTCAGAGAGCAGCGTGTGTCGCTAAAAGGAGCTCATAAAAAGATATTGGACTTGGCTAACACATTGGGCCTTTCAAACACTGTGATGAGACTTATTGAAAAACGAACATTCCAGGACCGTATTGTTCTGTTTGCGGGCATGTTTATAACCTGTGTTATCATGTTTCTGGCCTGGCGGTATCTCACATGACACCAGTTCCAACTGAGCCCGTTAATCGTCTGATTGCTGAGATTGTGCAGACAACATATTCCAAGGGTTATATCTTTGGACATACTAAATATTTTGAAAACAATTTGACTGGAAGTTGTTGGTGGCTAACCCACCAACAACTTTCAGTCAAATTGTTTTCAAAATATTCAGCAAATCAAGAGGTTGCTCATTGAAATTACTGTCTGGTGACTTACAGCAGCGAGAGATTTAATGTGCAAAGGTGGCCATATATGGCTTCTGCGGTGTTCTTAAGAAATACATTCTATTTGCCGGAAAAGTAGAGAATATTTGACATAAGTAGGCTGCAGTTATTGATTTGAATGATCATGATCGATTATTAGTTTAAGAATAATCATGATCACTTTATTAATCATTCCGGGTACAGATTACCCAGCCATAAAAAAAATATATAGCAGTGACGAAAGCTGCAAAGGGGTTTAGAAATGTCCATTTGCAGGCCAAGAGAAGACTATTTTAAAACTGGAATGCCTGGCTCGATGCTCATTCCAGAGATACATTTAAGAAAATAATCTCTTGGCCTGCAAATGGACGTTTCTAAACCACTTTGCGGCTTTCGTCACTGTTATATATTTTTTTTATGGCTAAGCAAAATGTGACAATCTCCGTGACCAATTGCATTAACCCCTAGCACTCTAAGGTCAAATTTTAAAATTTTCAAATTAAATTAAAAGATGAACTGGAGTTCATTTTTCAACAAATTTGTTGGAAGATGGTGACCTTCCATCAAAATTGTTGAAAAATGTACACCAGCTTCTTTGATATTGTCACAGAAAAAGATAGAATACTGACATCAGAGTGCTAAGCATTAAAGAGTAATTAAACTGTAGGTCTTGAAATCTTATGCATTAGAAATTATTAACGATTATTCGATTATTTCAATTATATAAATTCACAATTTAAAAATTAATTGTGATTTTCGATTAAATCAGGTAATCACGCACGTTTAGACACAAACTAGCACTGGAATAACTGGCTCTGTAACCTACAAGACAGCTTTGAAATCACTTAAAAATAACCAAGCCAGTGATAGGCAATGCTGGAATTACTGGCTCAGTAACATATCAGGGGTAGGCTTGCATAATTATTGGATTATTTGATTAATTATGATTATTCTTAAATATATGATCGTGGATGATCACAAAACTAAACTAGATTGCCCGGTTGATGATGTGTCATCGCAAATCCCCATGTTCACCACTTTGAACTTTTGACCCAACCCCCACAACTCACCCCATGGGGGCGGAGCCAA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12352	V-SNARE_C	Snare region anchored in the vesicle membrane C-terminus	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027027	Family	GOSR2/Membrin/Bos1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21230	VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000149	Molecular Function	SNARE binding	Interproscan
GO:0005484	Molecular Function	SNAP receptor activity	Interproscan
GO:0005789	Cellular Component	endoplasmic reticulum membrane	Interproscan
GO:0005794	Cellular Component	Golgi apparatus	Interproscan
GO:0006891	Biological Process	intra-Golgi vesicle-mediated transport	Interproscan
GO:0006906	Biological Process	vesicle fusion	Interproscan
GO:0012507	Cellular Component	ER to Golgi transport vesicle membrane	Interproscan
GO:0016192	Biological Process	vesicle-mediated transport	Interproscan
GO:0031201	Cellular Component	SNARE complex	Interproscan
GO:0031902	Cellular Component	late endosome membrane	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-