Gene detail

Detailed information of WZF239080 in Chaetoderma shenloong Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
WZF239080	30S RIBOSOMAL PROTEIN S2 PROKARYOTIC AND ORGANELLAR	chr4	37009834	37023363	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

WZF239080.1

CTATGACGATCCTGACAGACGGGAACTCCTACACAAGACAAGAAGAAAAATGTCGAAACCTTTTGACACCTTTAATATTGAAAGTTAACAATTTTCTTAATCTTGTTGCGATTTTATTCACGTAATCAACGTATCATACAACGCGATCATGGTGCCATTCAAACAGCAATTTTTAGGAATGGCTGGTCATTGGAGAAACTTTGTGAAGCCATTATCTAAGCAGACATATCACTCTCGTCGAGCTTTTACCGCAAATGTCAGTGTAGCAGCCAACACATCAGAATCAGAAAGAAGAGTAGATCCGCTAAAAGTGCCAGATTACTTTGAAGTTCGTGAATTAGTTAAGTTACCTGAACTCTTCCTCAAAAGAGTGCATTGGGGTCACAAAGAAGGAACACGCAATCCATTCATGCAGCAGTACATCTTTGGTTCACGACTTGGTGTTGATATAATTGATTTGGACCAAACTGTACCTCTCTTACAGGATGCATTAAACTTTATCGCTCACATCGCATACAGACATGGAATCATGGTCTTCTTCAGCCGCAGTAAGCAGAATATGCCTCTCATTGAAATGACCGCTAAAGAATGCGGGGAATACGCTCACTGCCGCTATTGGAGTGGCGGCACATTAACAAATTCTACCGTACAGTTTGGCGCTGTGACCCGCTTGCCTGATCTATGTATTTTCATAAATTCTTTGAATAATGTTTTCGAGCAGCACAACGCTATAAGAGACGCAAGCAAAATGTTGATTCCTATTGTTGGAATAATGGACACGAATTGTGATCCGCGTTTAATCACATACCCGATTCCGGGTAATGACGACACACCGTGTGCTGTAGAGTTGTATTGTAGACTGATTAAAGAAGCAATATTAAGAGGAAAGGCAAAACGTATCGAGGATGAACATAAATACGGTGACATTGATTGATCATCCCACAGTTAGCATTTGTTTGTATCTGGATGAAATGAATCATGTTTTATTTATGCTAGATAATAATATGCCTTTAATCTCCTCATTGGGGACTGAGTTGGATGTTTTTATTTTATACTGACGTACCCCATTAATGGCTAAATTTCTTAATAAAAATCTAAATATTGGCGTATTGAGTGTCCATTTGCAGGCCAATATATGACTATTTTTGAAAATTTACTAGCGGAATCACTGGCCAAGCCAGTCATTCCGCTAATAGATTTCCAAAAATATTCCTTGTAACCTGCAGATGGGCATTCCTCACAACCATTTCAGAGTCAGGCTTTGGACGGCTTCACCATGAAATGGTTAGTCATCAGGATTGGTCAAGAAAATTAAAACCTTTGCTTAGTGGATGTCCATTTAGAGGCCAAGAAAAGACTATTTTTGAAAATTTGTCAATGGAATGACTAACTCGATTATCATTTCTCAAGACTACTGAAAAGGCTGGTTTTGACCAGCTTGACCATTAAAGGGTCAATCGTTTTAACTCTTTCACTGATGAACTTTTAGTATCTCAATTTCTAGGCAAGACAGGAATGTTGTTTATTAATTGTATAGTTTTAGGGTTTAATGGGATTAGCCCTTTAATTGTCCAGATTTATCAAGAATATTTATAAACCAAGAGAAGTCCACTTCTGAAAGATAACCACTGAAATGACTGACACAGTTATCGAGCCAGTCATTCCAGTGATAAGTTTTCAAAAGGATCATCTCAAGACCAGTGCCAAGGCCGGTTTTGACCAACTTGAACATTAATTGGTGTTAAGGAACGTGTCTTGAAGTTCATAATCCCATGATAGTATCATGATAATTGACATAAACTGACGATAGTGTTGTGATAATTGACATAAACTGATGATAGTAACATGATAACTGACACAAACTGGTGATAGTAACATGTTAAGTGACATTAACTGATGATAGTAACATGAAAATGTACATAAACTGATGATAGTAACATGATAGTTGACATAAACTGACGATAGTAACATGATAATTGACATAAACTGATGATAGTAACATGATAATTGACATAAACTGATGATAGTAACATGATAATTGATATTAACTGACAATAGTAACATGATGCGTGACATTAACTGACAATAGTAACATGATACGTGACATTAACTGACAATAGTAACATGATAAGTGACATTAACTGACGATCGTAACATGATGATTGACGTAAACTGATGATAGTAACATGATAACTGACATTAACTGATGATAGTAACATGATAATTGACATTAACTGACAATAGTAAC

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00318	Ribosomal_S2	Ribosomal protein S2	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001865	Family	Small ribosomal subunit protein uS2	Interproscan
IPR005706	Family	Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid	Interproscan
IPR023591	Homologous_superfamily	Small ribosomal subunit protein uS2, flavodoxin-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12534	30S RIBOSOMAL PROTEIN S2 PROKARYOTIC AND ORGANELLAR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003735	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005763	Cellular Component	mitochondrial small ribosomal subunit	Interproscan
GO:0005840	Cellular Component	ribosome	Interproscan
GO:0006412	Biological Process	translation	Interproscan
GO:0015935	Cellular Component	small ribosomal subunit	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-