Gene detail

Detailed information of WZF236990 in Chaetoderma shenloong Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
WZF236990	BARDET-BIEDL SYNDROME 1 PROTEIN	chr15	43300626	43428007	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

WZF236990.2

CATGAATATACCCTCGCATGTGCGTAAAAATAGGGTGGTGCTTAACTTTTGCACAGGTGTATATATAACTCTTGGAATATGTTGTCTGCGCAAACTCACCAGTCAGACGATTAAGAAGTATTAAACTGCTTGCGTGCATCTGTCATTGAGTACTTGAGGGCATCACGCTGTCCTATTCTGTGTATGTTCCATCTACATGTACACGTACCATCATCAATTAGGACCAGCTGCACATTTCTGTAATTTTATTCAAACAATCTTTCATGCCAAACGTACATCACCACCACCACCACCCAGCATTTCTGACATTATTCTTTTTCACGCAATATAAGACGTATTTAGTTTGTTTCTTTCCTTCTTCAGGTACCAGCTTGATGAGTGAAAACACAATAATTGACCTGCCCACAGGTTTGGCAACATTTTATATGGATGTCCTAGAGCCTAGGACTCCAGCCATAGCCGTAGCATCGGGACCATTTGTTTATGTGTACAAGAACCTGCGACCATACTTCAAGTTTACACTGCCCCCGCTCGAAATCAATCCAATAGAAGAAGGACTATGGGATCAGGCCAAACAGGAGAATATAGACAAAATAGTGCTACGAGAAATGTTAGAGAACTTGAGGGTTGAAGGTGTGTGTTTAACCACACGGTCTATGAGGTTCCTACAATTGGATGCCAGTGATTTAGATGCATTTATCCAGGTATACAGGGCTCACCCACTGAAAAGACAGACTGTAATCACAAGTTTGAGCACGGTTAAGAAGTCGCTCGCTGATGAGGATGCCATTAGTTGTCTTGTTCTGGGTACTGAGAGTAAATCTGTGTATATCCTTGATCCGGAGGCGTTTACAGTTCTGGCCACAATGGATGTCCCGAGTGTGCCTGTGTTTCTCAGTGTTACTGGTCTCTATGATGTGGAATTCAGATTGGTGGTCGCCTGCCGGAATGGGCGTGTTTACACGCTGAAACGGGGATCTAAATCGGCCAAATACAGCATAGAGTTGACATCCGAGGCTGTTGGGTTGGAGCGACTGAACAAAAACATCATCGTCGGCTGTATGGATCAGACACTCAATTGTTACAGTACTAAGGGTAAAAGATTATGGATTGTCAAATTACCAGTGCCTATCACAACAATGGCGACATTAGACTATAAACTGAAAGGTTTCACTGCACTCCTTGTGGCTCTGGATAACTGCGAGGTTCATATTTATAAGGACAAACACCTGGTGAACGTGATTAAAACACAAGATGTGGTCACAGGAATGAGATTTGGACGATTTGGTAGAGAGGATGGCTCACTCATAATGACAACGAGAGGAGGTGGATTGATTGTTAAGATGTTGAAGCGTGGCGCCACATTTGATCAGCTGCCTGTCGCACCAGGTCCATCAAATGCACAGCACACAAAGCTGAATGTTCCCAAGAAGACAAAGTTGTTCGTCGACCAGACAATGAGAGAGCGTGACAATGCTGTTGCCATGCATCGAACATTTCAGAGAGATCTATACTTGCTGAGATTGAAGACGGCCAGAGAATACGTGAAAGCCTTGGATAACAGTATGAATCCAATATCGTCCAATCCCGCAGAGCCACTGAAACTCTCCGCACAGGTGCAAGGAATCGGTCCAGTGTTCAAGCTAACAGTTACTCTTCAGAATACATCTATGTCACAGGCATCCACAAGTTTGCTAATCACATTTGATTATGATAATAAACTTTACGTGTTCAGGAAGACACTTATTCAGGTGCCTATGCTTGTACCTGGATTACAGTATATGTTCGACACATTTGTTGAGTGCATCAGTGACAAAGGAATACAGGATAATGTTAAGGTATTTGTAGTGAAACAAGGGAACAGCGTCCCCATCATCACTGCGGTGATCAGTATGCCCGTCAGCGAGAATGCTGTTATGGCATGAGGAGTAAATTTTAGTTCTAGCTGTGCCACACCCATTTCTAGCTATGCCACACCCATTTCTAGCTATACCACAACCATTTCTAGCTATGCCACAACCATCTCTAGCTATGCCACACCCATTTCTAGCTATGCCACACCCATTTCTAGCTATGCCACACCCATTTCTAGCTGTGCCACACCCATTTCTAGCTATGCCACACCCATTTCTAGCTGTACCACAACCATTTCTAGCTATGCCACAACCATCTCTAGCTATGCCACACCCATTTCTAGCTATGCCACACCCATTTCTAGCTATGCCACACCCATTTCTAGCCAGGCCACAACCATTTCTAGCCATGCCACAACCATTTCCAGCTATGCCACAACCATTTCCAGCTATGCCACACCTATTTCTAGTATGCCACACCCATTTCTAGCTATGCCACACCCTTTTCTAGCTATGCCGCAACCATTTCTAGCCATGCCACACCCATTTCTACGTAGCCAGTTCCTCCCACTCTATATGCACTTCTGAATCGATTTTAAGTATTTGAGCCATGAATTTCCAGAATCTTAATTTCAAGGGAACTACAGGTGTGAATATTTTGAAACTAATTTGACTGGGAGCTGCTGCTGCCTATCCACCCCCATAGTATGTGTATGTGACTGTGCGTTCATGCCTGCATTTGTGTGTTAGTATTGCATGAATGGTAAACACTGAGTCCATACATGAATGGTTTACTGTGTGTATGCGTACGTGCATGTGTCCATGCGTGCGGGAAGGTGCATGAGTGAAATGAATTGCTGCATTTCGGGATCGACATTGATATTGTCGTAATAGACCTTTCCAGTTTTAACGCCACCCACCTTTATCTAATCTCCACCCTAACTTCACCATGTTGGGATTGATCGATCCCTGAATGCCCAGACTATCAATTGCCTGAAAACTATACAGGTAAGTTGTTGAATATTTTGTAAATAATTTGACTGGCAGCAACAACGCCCCGTCAAATTAGTTTCAAAATATTCAACAGGATATTTATTAAATTGTAAAAACATACAATTCGTACAACAACGCATAGTACGTCTTCAATTATGCGTTTGTGAATTACTTATCTACACCATTCATGACGACATTGATTGTGATGTCATTCTATCCGTCATGTAGCTGATTATGGCATCATACGATGGATGGATACAGTGGAAAGGTCCATTTCCTTCAAAGTCATTATGATGGTAACCTTCATAAATATTATTATTTACATGCCTTCCCCTAATGTATATTATCTGTTTAACCCATTACTGGTCAAGCCGGCCAAGACTGGCCTCTGTAATGTTCTCGACAAATGTCCATTTGCAGGTGAAGAGAAGACAGTCTTTGAAAATTTAGCGCTGGAATGATTGGCTGGATAGCCAAGCCGGTCATTCCAGCTGTAAATTTTCAAAATATCCCTCTTTGTTGCAAATGGTTATTGAATCAGCAAATATTTTAGATTATCTTGAAAAAATCTGACCATTGATAACAAACCACAGCAAAATGTTGTCACAAAAGATGGGTGGTCTCTTACTACAGATGTGGTCACATATGAAATCTATTGTGCCACAAGATGGTGGTTCTTTAAGACAGGTAGTCACTTACTCACTTGTCATATACAACTACCTGTCATGGCACCAATGGACCTTTCCAGTTTATCCATCAATCATATGACATCATAATCAACTACGTGACTTGTAGGATGACATAATCAATGATGTCATGAATGACGTAAATAAGTTCATTACGAATGCTTAACTGATGACAGACTAAGCATTGTTGTGCGAATTGTACATCTTTACTATTTCATAAAGATGCTTTTGAATATTTTGGAACTAATGTGACTGCAACAGCACCCAGTCAAATTAGTTTCAAAATATTCAACAGCTTACGTGAATAGTTCTCTGGACATTGATAGTCAGGCAGTTCAGGGATTGATAGATCCCAACACGGCGATGTGTGGGCGGAGCTTAGCTAAAGATAGACAAGACATAGCTAAAACTGGATTTCTCCATTGGCAGTCTCGAACAGATTTACTTGTAGCTCACTATTCATTGTTTTACTGAAGAGCTGTTCTTATATATCTTTAAGATTTGTAGTAATATTGTACACATTCCGTCCATAGTATTTGAGCTCTTTCACACTCAAATTGGGAAAAAAACTCCTTCAGCAGTGGTCTTGAGAAATGTCCATTTGCGGAACACGAGAATATTTGTGAAATTTTACCATTTGAATGACTAGCTCAATAACCGATCCAGTCATTCCGGTGATAAATTTTCAAAGATAATCTCTTGGTATACAATTTAACATTTTCCATTAGATTTTGAGTTTCGTGTGCAAATTTGAGGATGAAAGGGTTAATGGCTAGATAATTATTTATTTTGTATATATTGTACAGACGTATCTATATTTGTTTTAAAAAAACATTTCCATTACAAAAACATGCGATTTATGTTATTCCTATAAAATATCATAACCCACAACCTGTACTCATAAGAATTATGTACACACAAGCCCTCATTAATCCTTTCATGCCGAAGCGAGCCCAAACTGGCCACTGAGATGGTCTTGAGTAATGTCTGTTTGCAG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14779	BBS1	Ciliary BBSome complex subunit 1	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR028784	Family	Bardet-Biedl syndrome 1 protein	Interproscan
IPR032728	Domain	Bardet-Biedl syndrome 1, N-terminal	Interproscan
IPR036322	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR20870	BARDET-BIEDL SYNDROME 1 PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005113	Molecular Function	patched binding	Interproscan
GO:0005119	Molecular Function	smoothened binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005813	Cellular Component	centrosome	Interproscan
GO:0005930	Cellular Component	axoneme	Interproscan
GO:0034464	Cellular Component	BBSome	Interproscan
GO:0061512	Biological Process	protein localization to cilium	Interproscan
GO:1905515	Biological Process	non-motile cilium assembly	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-