Gene detail

Detailed information of WZF236530 in Chaetoderma shenloong Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
WZF236530	NUCLEOPORIN-LIKE PROTEIN 2	HiC_scaffold_2782	6420	36383	-

Gene Structure

More details in Jbrowse Sequence

CDS

WZF236530.1

ATGCAAAATACTAACAAGCAGATCTGTCATTATTTTAATACAAGATATGGATGCAAATATGGAATAAACTGTCAGTACTCCCACCAGCCTATCCCGCGTGAAGGTTCTGAGCTTATTGATAAAGGTGGTACAACGACCAAAAGTAACCATGATATTTTAAGTCGTAAACAGCAGCATCGTATTTCAGTAACGCGACAGGTTTCTGATTATTCAACTCAAGGATATCAACATGAGGAATCAACGGTGCAACAGAGACTAATCTGCCATTACTTTCGAACATTTGGTTCGTGTAAATTTGGAAGACATTGTCAATTTAAGCACATTTCCCCTAATTATGGCCCACGCTTTGGAGCAGCAGACAAATTGTCAGCATCATCGGGAATCCAAGGTGATGAGCTCAATGTGAGAAACCAAACAAAAGATTTCGTACGAAAGCCGGCTAAATGTCGATTTTTCTTGTCTGGAAATTGTCGGTTTGGTGAAAACTGCAAGTTTTCTCATCCAAATGCGAGAGTGAGAGATCATACTAAAAATGAATCTGACTTGACATCAGTGTCTCAAGCTAAAAGTGTCTTTACACCTGACCGTCCTATATCGTCTGGAGCATCAGACAGTAACAGTCATGGACAGCATTATAGAGATACTAATGATGCCCAAGGAGCGCCGCGTGTGCCTAGGTATGTGCCGCGACAATCACAACCTAAGATTGACAAAAGTAACGTGACAGAAGATGAAATAAAGAAATTTCGGACTAGTGAGTGCGAGAGAATAAAGCGGCGCTTCACAAAACACTTGCTTGAAGTTCTGAGTGAATCAGAGGATGTCAGTGAATATCAGTTCAAGGTTCAGCCGACAGACCCTGACTGGCCATTTGATATTAAGAGCTTTGATTTTGTCATATCGATTCCAAAAGATTACCCAGCTACATTGTTCAGTGTAAGTGTACCCAGTGATCAGGATCTACCAGAAACTGTCCGTCGTTTTATTGAGGTATCGGTTGATGAATGGATCCAGGAGAAGAGAAACAACACTGCAGTGGAGCTCCTCTTTCTGCCGCTTCTGCGATGGATAGACAGGAACCTAGAGGAGATTGTCACAAGTGGCCTTAGACAGTTGAAGCGTGAGTTGGTTGCGCAGTCAGCAGGCTTTCAGTTTATCCCGGCGGCTGATCTGGTGAAGGCTCGCACAGCAAATACTAGTAGTGGTAATGATGATAAGAGTGAGGTGAAGGAAGAGGAGAGTGGTGAATCAGATGAAGTTTCTGAAGACGATTCAGACGAAGCTAACAAAGAAAACTTGGATGAGGTGGGGGAGAGTGGTGGACAAGACAGCAGCAAGGCTAGTCATGACAATGACGCAAGACGTGGAACCGAGGTCCTTCTGAGGAATCTGCAGCTGGTTGGAAATGCTGCTACCTTGCTCCTACCGAAGGCATATTTCATTGTGCAGTGCGCCAGATGCAAGCATCGCAGTGAGTTTAGCACGCCAGCTGGTCGCCAGAACCAAGTGATCTGTGGGAAATGTAACAACGTTCAGCTGATCACATTCCGGGCCGTGTTGGCTCACCAGTTTTCTGCTGTTGTTGGTTATCTGGACCTGGATGGTTGCACCGCATTTGACCTGATCTTGCATGAAAGCAGTGTGACTCTTGGCTGTTTGAATTGCTCCAAAGAAACAAGAATCGAGGGAATTCAACCTGGAGCCGGTCGCGACATCTGGTGCCAGTCATGTCATCAGAAAATGAGGGTCGTCACTGAGAATGCACGTTTCCAACAACTGCGACCAACACTAATTACAACCGATGATCAACAGGCGTTCAACATTCCCGTGAAGATGCTTAAGAAGGTGCCTAAAGATCCCTCTATTCAGGAAGGGAGACCACTCCCTGATGTAGGAACATGCAAACATTTCAAGAAGAGCTTTCGTTGGCTCAGATTCCCGTGCTGCGGTAAGGCATACCCATGTGACATATGCCATGATGAAAATGAGACGGACCACGAGATGAAGTTTGCTAATCGAATGATCTGTGGTTATTGCTGCAAAGAACAGCCATATGCCGCAGAGCGACCATGTACAGCTTGTAACAGCAGCCTGACCAAGGGTCATACAATGCATTGGGAAGGTGGAAGAGGCTGTCGTGACAAAATCAGAATGAGCAGGAATGATACACAGAAGTATGCAAACCTGCACAAGACTGTCTCGAGGAAGGCCAAGGATAAGAATGAACCAAAATCTAAGAAAAAAGAAAAAGCATAA

Transcript

WZF236530.1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05495	zf-CHY	CHY zinc finger	Domain	Interproscan
PF14608	zf-CCCH_2	RNA-binding, Nab2-type zinc finger	Domain	Interproscan
PF18044	zf-CCCH_4	CCCH-type zinc finger	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000571	Domain	Zinc finger, CCCH-type	Interproscan
IPR006575	Domain	RWD domain	Interproscan
IPR008913	Domain	Zinc finger, CHY-type	Interproscan
IPR036855	Homologous_superfamily	Zinc finger, CCCH-type superfamily	Interproscan
IPR037274	Homologous_superfamily	Zinc finger, CHY-type superfamily	Interproscan
IPR041367	Domain	E3 ligase, CCCH-type zinc finger	Interproscan
IPR051767	Family	Nucleoporin NUP42 domain-containing protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46527	NUCLEOPORIN-LIKE PROTEIN 2	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005049	Molecular Function	nuclear export signal receptor activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005635	Cellular Component	nuclear envelope	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0046872	Molecular Function	metal ion binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-