Gene detail

Detailed information of WZF235330 in Chaetoderma shenloong Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
WZF235330	MITOCHONDRIAL 2-OXODICARBOXYLATE CARRIER 1-RELATED	chr6	79302524	79399768	+

Gene Structure

More details in Jbrowse Sequence

CDS

WZF235330.1

ATGGCATCTGAGTTGTTTTCATTTGATACTGAGGGATCTGACTTGATATCCAAAGTTTGGCCATGTGTCAAGAAAGCAAAATGTGAACCCAGGTCACATCAGTTTGAATACTTCAAGCGAGCAGATCACGAGAGCCTAAGACATGTCTTTTTAAAGTATGCGAGTAAGGAGATGAATGGCGACCATTACATGAACTATTCTGACTTCATCGTGAGCTTCTTACAAATCTTACCCGCAGATACCAACAACCCTGAAGTTCTAACTGTACTCGGTAACGCCATCGACACAACTAAAGACAAGTATATATCGTTCGCAGAATTCCAGGCTTTTGAAGCTCTTCTTTGTCTTCCTGATGCATTGTACGCTCTCGCGTTTCAGATCTTTGACAAGGCGGGAAATGGATACATATCATGTGATGAATTCACGAGCATTATCGCGAGTACAGTACTCCATAAACAGATGCCATTTGACTTTGAGAGTGAGTTTCTTCATCTTCATTTTGGCAAAGATCTCTCGCGAAAACTCACATATGCAGAGTTTACTCAGTTCATTCATGATTTTCATGAAGAGCACGCGCTACAAGCCTTTAGACGTCTCGACAAAACACACACTGGCCAGATTTCAGCTATGGACTTCAGTGATGTCATGATTTCATTAAAGAGCCATCTTCTAACACCGTTTGTTAGAGACAACCTCGTCACAGTAGCAGTTGGAGGCGATAGGAGACAGCAGCTTAGCTATACTTACTTCATAGCCTTCATTTCACTTCTCAATAATATTGAACTCGTCAGGATGATATACGATATTGCGTCAAAACACAATCCAAAATGTGAGGTCACAAAAGAGGAAATGTTATATGAATCTCAGGACTTTACTCAAATTACGCCACTTGAAATTGATATCTTATTCCAGCTTGTCGGACTTAAGCATCAAACAGGGAGGGTAACATTTGAGGATTTGGAAGCAATTTCACCGATGCATGGAAAAGAAACGCCATACTCAATTAAACTACAAGTCGCTGAGGAGAATCTTCGCGGGGATTTAGAGATTCATCGAGGGATTGGCGTACAGATTCTGGAAAGTGGATATAGATTTTCGCTGGGTGCTTTAGCTGGTGCTACTGGAGCCACAGCGGTGTATCCTATTGACCTGGTGAAAACACGCTTACAGAATCAGCGCACTGGCTCATACATCGGTGAACTCATGTATAAGAACAGTCTAGATTGTTTTAAGAAAGTGATTCGACATGAGGGAATCCGAGGACTGTATCGTGGTCTCGCGCCACAGTTAGTAGGAGTTGCTCCAGAAAAGGCTATCAAACTTACGATGAATGACTTAGTTCGTGACAAGTTGTCTCGTCGTGATGGCTCCTTACCATTATGGGCCGAGTGTGTAGCTGGAGGATGTGCCGGTGGTTCACAAGTTATGTTTACAAACCCGCTGGAAATCGTCAAGATTCGTCTCCAAGTGGCGGGTGAAATTGTTGGTAAGCGCAAAGTTAGCGCTTGGGCGATTATGAAAGATCTCGGCTTCTTTGGACTCTACAAGGGTTCAAAGGCCTGTTTCCTGCGTGATATACCTTTCTCTGCGATATATTTCCCTGCTTATGCACATTCCAAAAAAGCTTTAGCCGATGACAATGGCTACAATTCACCATTGTCTTTATTAGCTGCCGCTACTGTAGCAGGTATTCCCGCTGCTGCCATACCTACCCCCGCCGATGTGATCAAAACTCGTCTTCAGGTTCAAGCTCGCTCTGGCCAAACAACATACACAGGTTTAATGGACTGTATCCGCAAGATCTGGGCCGAGGAAGGTGCAAGTGCTTTCTGGAAGGGAACAGCAGCTCGTGTGTGTCGATCAGCGCCGCAGTTTGGTGTTACCTTGGTAACATATGAGCTGTTACAGAGAATGCTCTACATCGACTTTGGAGGAAGGCGACCTGAAGGATCCTCTGTGAAGAAAACCAGTTTCGACGACTCGATATCGCGAAATCCAGACCACATCGGCGGGTACCGGCTGGCGCTATCTACCTTCCAGGGCATAGAAATGAAATTTGGCCTGTGTTTACCGAAGTACAGCAGTGCTGTTTGA

Transcript

WZF235330.1

TCTGCTGTCGGTAGCAGAAACAACATGGCATCTGAGTTGTTTTCATTTGATACTGAGGGATCTGACTTGATATCCAAAGTTTGGCCATGTGTCAAGAAAGCAAAATGTGAACCCAGGTCACATCAGTTTGAATACTTCAAGCGAGCAGATCACGAGAGCCTAAGACATGTCTTTTTAAAGTATGCGAGTAAGGAGATGAATGGCGACCATTACATGAACTATTCTGACTTCATCGTGAGCTTCTTACAAATCTTACCCGCAGATACCAACAACCCTGAAGTTCTAACTGTACTCGGTAACGCCATCGACACAACTAAAGACAAGTATATATCGTTCGCAGAATTCCAGGCTTTTGAAGCTCTTCTTTGTCTTCCTGATGCATTGTACGCTCTCGCGTTTCAGATCTTTGACAAGGCGGGAAATGGATACATATCATGTGATGAATTCACGAGCATTATCGCGAGTACAGTACTCCATAAACAGATGCCATTTGACTTTGAGAGTGAGTTTCTTCATCTTCATTTTGGCAAAGATCTCTCGCGAAAACTCACATATGCAGAGTTTACTCAGTTCATTCATGATTTTCATGAAGAGCACGCGCTACAAGCCTTTAGACGTCTCGACAAAACACACACTGGCCAGATTTCAGCTATGGACTTCAGTGATGTCATGATTTCATTAAAGAGCCATCTTCTAACACCGTTTGTTAGAGACAACCTCGTCACAGTAGCAGTTGGAGGCGATAGGAGACAGCAGCTTAGCTATACTTACTTCATAGCCTTCATTTCACTTCTCAATAATATTGAACTCGTCAGGATGATATACGATATTGCGTCAAAACACAATCCAAAATGTGAGGTCACAAAAGAGGAAATGTTATATGAATCTCAGGACTTTACTCAAATTACGCCACTTGAAATTGATATCTTATTCCAGCTTGTCGGACTTAAGCATCAAACAGGGAGGGTAACATTTGAGGATTTGGAAGCAATTTCACCGATGCATGGAAAAGAAACGCCATACTCAATTAAACTACAAGTCGCTGAGGAGAATCTTCGCGGGGATTTAGAGATTCATCGAGGGATTGGCGTACAGATTCTGGAAAGTGGATATAGATTTTCGCTGGGTGCTTTAGCTGGTGCTACTGGAGCCACAGCGGTGTATCCTATTGACCTGGTGAAAACACGCTTACAGAATCAGCGCACTGGCTCATACATCGGTGAACTCATGTATAAGAACAGTCTAGATTGTTTTAAGAAAGTGATTCGACATGAGGGAATCCGAGGACTGTATCGTGGTCTCGCGCCACAGTTAGTAGGAGTTGCTCCAGAAAAGGCTATCAAACTTACGATGAATGACTTAGTTCGTGACAAGTTGTCTCGTCGTGATGGCTCCTTACCATTATGGGCCGAGTGTGTAGCTGGAGGATGTGCCGGTGGTTCACAAGTTATGTTTACAAACCCGCTGGAAATCGTCAAGATTCGTCTCCAAGTGGCGGGTGAAATTGTTGGTAAGCGCAAAGTTAGCGCTTGGGCGATTATGAAAGATCTCGGCTTCTTTGGACTCTACAAGGGTTCAAAGGCCTGTTTCCTGCGTGATATACCTTTCTCTGCGATATATTTCCCTGCTTATGCACATTCCAAAAAAGCTTTAGCCGATGACAATGGCTACAATTCACCATTGTCTTTATTAGCTGCCGCTACTGTAGCAGGTATTCCCGCTGCTGCCATACCTACCCCCGCCGATGTGATCAAAACTCGTCTTCAGGTTCAAGCTCGCTCTGGCCAAACAACATACACAGGTTTAATGGACTGTATCCGCAAGATCTGGGCCGAGGAAGGTGCAAGTGCTTTCTGGAAGGGAACAGCAGCTCGTGTGTGTCGATCAGCGCCGCAGTTTGGTGTTACCTTGGTAACATATGAGCTGTTACAGAGAATGCTCTACATCGACTTTGGAGGAAGGCGACCTGAAGGATCCTCTGTGAAGAAAACCAGTTTCGACGACTCGATATCGCGAAATCCAGACCACATCGGCGGGTACCGGCTGGCGCTATCTACCTTCCAGGGCATAGAAATGAAATTTGGCCTGTGTTTACCGAAGTACAGCAGTGCTGTTTGACGAGAACCCACTCTTAATTAGGCTGTAATTAGATCTGTAGAAAGTATTGTTAATTATAAATTATATTGTACATAGAGAGTCAGGACGTTTGTGGTAAAGCCAGCAAAACATGGCTTCTTCAGTGCTCTTCTGAAATCTCTACTTGCAGGCCATGAGAAGAGTATTCTTGAAAATTTACTACTGATATGACTGGGTCGATAACCTAGCCACGATAACTGAGTGTCATTCAAGTGGTAAATTTTCAAAAGGCCCTCTCCATGACAACGCAAATGGAATTTGACGAAGCAAATATTGAGGTTTAATTGACCATTACATTGATGCTACTATCAATGATT

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00153	Mito_carr	Mitochondrial carrier protein	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002048	Domain	EF-hand domain	Interproscan
IPR002067	Family	Mitochondrial carrier protein	Interproscan
IPR011992	Homologous_superfamily	EF-hand domain pair	Interproscan
IPR018108	Repeat	Mitochondrial substrate/solute carrier	Interproscan
IPR023395	Homologous_superfamily	Mitochondrial carrier domain superfamily	Interproscan
IPR051028	Family	Mitochondrial Solute Carrier	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45678	MITOCHONDRIAL 2-OXODICARBOXYLATE CARRIER 1-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005313	Molecular Function	L-glutamate transmembrane transporter activity	Interproscan
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0006810	Biological Process	transport	Interproscan
GO:0015183	Molecular Function	L-aspartate transmembrane transporter activity	Interproscan
GO:0015810	Biological Process	aspartate transmembrane transport	Interproscan
GO:0015813	Biological Process	L-glutamate transmembrane transport	Interproscan
GO:0022857	Molecular Function	transmembrane transporter activity	Interproscan
GO:0043490	Biological Process	malate-aspartate shuttle	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-