Gene detail

Detailed information of WZF234270 in Chaetoderma shenloong Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
WZF234270	DNA-DIRECTED RNA POLYMERASE SUBUNIT K	chr16	96785714	96817992	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

WZF234270.1

AGCAATTTCACACCTATGAACTTGATGTATCAACAACAGTCTGGTATTCCAGCTATAATCTGGCTGTATTGCAGTAATTTCACAGTGGACTTGATGTACCAACGACAGTCTGGTTTGCCAGCTATAATCAGATAGGGTGATGGTTGGATGTTCTGTGTGTTCGAGAGGCGGGATCTACAAAAGAAAGAAAGAAAGTAAAGAAGAATGGCCGAAGAAGAACATGATGCAGGAGACTTTGATGAACCTGACGATGTTGATGATGATGAGCCATTAGATGAAGCTGTTGTGGAAACACAGGAAGGGGGAGGTGAACATAGTGAAATACTGCCTGCTGCAGAGGTGCAGCGTCCAACAGATCCAGATAAGCGCATTACAACACCATTTATGACCAAATATGAGCGAGCTCGTATACTTGGTACACGTGCATTGCAGATTGCGATGTGTGCGCCTGTAATGGTGGAGTTAGAGGGAGAGACAGATCCTCTACAAATAGCCATGAAAGAATTAAAAGCGAGAAAGGTCCCGATCATTGTAAGACGTTACTTGCTTGATGGCAGCTTTGAAGACTGGAGTTTAGATGAACTAATAATTTCCTGAAATAGCAAGCGTAACAGTAATCCTTTGACCATCAAATTAGTTCATGAAAATTTTAATCTTCTCAATGAAAATGTCTATTTGCAGATCAAGAGATTATCTGTGAACGTCTACCACTGTAACGATCCAGTCATTCCGATGGTAAATCTTAAATCTCTATCTTCTCTTGGTGTGCAAATAGACATTTCTCACGACGACTACAAGAGGCTGTTTTTGGCCGACTTAAGTGTTAACCCTTTGGTCATACCGGCCAAGACCGGCGTCTACTATGGTCTTGTGGAATGTCCATTTAAAAATTGTATTCTCTCGGTCTGTAAATGAACATTCAATAAGAAAATACTAAAATTTTTGTTGACCAAATTTGACCATTAAAGGGTTAACTCTCTAGTCTGAATGCGTTGAACCTTGAAGTCCTAGAATCCTAATTTCCAGACAATTGATGAATCCATTTCCTCACTCAATCATATGATGTCATAATCAACTACACGACGTGTATGCTGACGTCATAATCATGACGTCATGAATGATTCGATTAAGCCAGTCTTTAAGGCTTAATAGTCCAACACGTACAAATTGTATGTTTCTGCTATTTAAGAAACATGCTGTTGAATATTTTGAAACTGATTTGACTGGGCGAGCACCCAGTCAAATCGGTTTCAAAATATTCAACAGTTTACCTGTATAGTTTCTGGAAATTTATAGTCGGGAAGTTCAGAAATCAATCGATCCCACCACGAGTGAGGTGTGGGTGGAGCTTAGTTAGAGGTAGGCGGGGCATAGCTAAAACTGGAATGGTACATTGTACAGTTAAGCTGCTGGATAATTTGTATTTATTTTGACTGAAATCTATTGCTGCCATTATATGCAGCAATGGTTTATGGCACAAACAGTTGCCAGTCAAATTTGTTTCAATGTCTTTAATCTAACACTTATTGTCAGCTTGTAAATGATTTTTGTGTTAGAACTTTCTGGTTTAAAGGGTTACGGTTTGTCAAGGGAGATCATCCCGGATTAACTCTGCAGTGCTCTTGAAAAATCTCTATTTGCAGATCAAGCCTTTTTGAAAATTTACCACTGGAATGACTGGCTCAATTACTGAGCCAGTCATTCCAATGGTAAATTTTCTCAAATAGTCTTCTCTTGGTTTGTAAATGGACATTTTTGAGAAAATTGAACAAATTTGAGACGGACCTTTCTGAGAATCCGGTCATATTCGTGGTTTGATTTTCGGGCATACACTCCCTATCATATCTGGTTATTTTTTTATGACTGGAATTATCTCCCTTCTACGAAAAGTAGAAGCATTTTAAAATTCATTCATCATTGCATTGTACAAATTCATGAAACCATTCTAGAGTAAATATAGACATTTTAATTATAACATCATACTTCATCTTGTAATTAATAAAGCCATTAAAATATTTTATTTATTTCTGCAATTTATGAATCCATTTCCTCACTCAATCATATGACGTCATAATCAACTATGCGACGTGTATGCTGACGTCATATATGATTTGATTACGCCCATCTTTAACCTTTAGTAGTCCGACACATTGTACGAATTGTATGTTTTTGTTATTTAAGATACATGGTGTTGAATATTTTGAATCTAATTTGACTGGGCGCTTTTGCTGCCATAGGCAAAATATTCAACAGCTTACCTGTATAGTTGTCTGGAAATTGATAGTCAGTGAGTTCAGAGATCGATCGATTGGTAAAACTGGAACGGTCCATTACTTTTCCATCTTATTTAGGTGTGTTTGTGGGTGGTCACAGAGATCTAACAGACATACAGGAGTATCAATAATCCATATATACTTATGAACTAAGATGTCATATTTTCACATGCTTGGCTACTATGCCTATTTTTAGCTCAATTGTAGCTTCTAGCTCACCTGGCCTGAAAGGCAGGGAGCTTATGC

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01192	RNA_pol_Rpb6	RNA polymerase Rpb6	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006110	Family	RNA polymerase, subunit omega/Rpo6/RPB6	Interproscan
IPR006111	Family	Archaeal Rpo6/eukaryotic RPB6 RNA polymerase subunit	Interproscan
IPR020708	Conserved_site	DNA-directed RNA polymerase, 14-18kDa subunit, conserved site	Interproscan
IPR028363	Family	DNA-directed RNA polymerase, subunit RPB6	Interproscan
IPR036161	Homologous_superfamily	RPB6/omega subunit-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47227	DNA-DIRECTED RNA POLYMERASE SUBUNIT K	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0001054	Molecular Function	RNA polymerase I activity	Interproscan
GO:0001055	Molecular Function	RNA polymerase II activity	Interproscan
GO:0001056	Molecular Function	RNA polymerase III activity	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0003899	Molecular Function	DNA-directed 5'-3' RNA polymerase activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005665	Cellular Component	RNA polymerase II, core complex	Interproscan
GO:0005666	Cellular Component	RNA polymerase III complex	Interproscan
GO:0005736	Cellular Component	RNA polymerase I complex	Interproscan
GO:0006351	Biological Process	DNA-templated transcription	Interproscan
GO:0006360	Biological Process	transcription by RNA polymerase I	Interproscan
GO:0006366	Biological Process	transcription by RNA polymerase II	Interproscan
GO:0042797	Biological Process	tRNA transcription by RNA polymerase III	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-