Detailed information of WZF232570 in Chaetoderma shenloong Gene info
Gene IDAnnotationChromosomeStartEndStrand
WZF232570MITOCHONDRIAL RIBOSOME PROTEIN L39/PROLYL-TRNA LIGASE FAMILY MEMBERHiC_scaffold_2456914460168-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00005ABC_tranABC transporterDomainInterproscan
PF00587tRNA-synt_2btRNA synthetase class II core domain (G, H, P, S and T)DomainInterproscan
PF03129HGTP_anticodonAnticodon binding domainDomainInterproscan
PF12704MacB_PCDMacB-like periplasmic core domainFamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR002314DomainAminoacyl-tRNA synthetase, class II (G/ P/ S/T)Interproscan
IPR002316FamilyProline-tRNA ligase, class IIaInterproscan
IPR003439DomainABC transporter-like, ATP-binding domainInterproscan
IPR003593DomainAAA+ ATPase domainInterproscan
IPR004154DomainAnticodon-bindingInterproscan
IPR006195DomainAminoacyl-tRNA synthetase, class IIInterproscan
IPR017871Conserved_siteABC transporter-like, conserved siteInterproscan
IPR017911DomainMacB-like, ATP-binding domainInterproscan
IPR025857DomainMacB-like periplasmic core domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR033730DomainProkaryote proline-tRNA ligase core domainInterproscan
IPR036621Homologous_superfamilyAnticodon-binding domain superfamilyInterproscan
IPR044140DomainProline--tRNA ligase, anticodon binding domainInterproscan
IPR045864Homologous_superfamilyClass II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)Interproscan
IPR050062FamilyProline-tRNA synthetaseInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR42753MITOCHONDRIAL RIBOSOME PROTEIN L39/PROLYL-TRNA LIGASE FAMILY MEMBERInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0004827Molecular Functionproline-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006418Biological ProcesstRNA aminoacylation for protein translationInterproscan
GO:0006433Biological Processprolyl-tRNA aminoacylationInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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