Gene detail

Detailed information of WZF232260 in Chaetoderma shenloong Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
WZF232260	RESPIRATORY NITRATE REDUCTASE	HiC_scaffold_1	4739862	4744016	-

Gene Structure

More details in Jbrowse Sequence

CDS

WZF232260.1

ATGAGTCATTTCTTAGATAATTTGAACTTTTTCGGAAAGAAAATAGATACTTTCTCTAATGGTCATGGGATAACAACAGGTGAAGATCGATCTTGGGAAAATGCTTATCGTGATCGTTGGGCGCACAATAAAATCGTTCGCTCTACGCACGGTGTAAACTGTACTGGCTCTTGTAGTTGGAAAATTTATGTTAAAAAAGGTCTTGTTACTTGGGAAACTCAACAAACTGATTATCCTAGAACTCGTAATGATTTGCCAAACCACGAACCTCGTGGTTGTGCAAGGGGTGCAAGTTATTCTTGGTACCTGTACAGTGCAACTAGATTAAAATACCCATTAATCCGTAGCCGTCTACTGCGTTCTTGGATTGATGCAAAAGCAAAACACAAAGATCCCGTAGAGGCATGGGCAAGTATTCAAGCTGATGAAAAACAAATTCGTGCATACAAGTCTATTCGTGGACTTGGCGGTATGGTTCGTGCCGATTGGGAAACAGTAAATGAGATAATTGCGGCTGCAAATGTATATACAATTAAAAAACATGGTCCTGACCGTATTATTGGATTTTCTCCTATTCCTGCTATGTCAATGGTATCATACGCAGCGGGTTCTCGATACCTAGCGCTTATTGGCGGAGTAAGTTTATCATTCTACGATTGGTATTGTGATTTACCACCAGCATCACCACAAACTTGGGGTGAACAAACTGATGTACCTGAAAGTGCTGATTGGTTTAATTCTAACTATATTATTGCTTGGGGTTCAAACGTACCGCAAACTCGTACGCCTGACGCTCACTTCTTTACAGAAGTTCGTTATAAAGGTACAAAAACTGTTGCGGTTACACCTGATTACAGTGAAGTTGCAAAATTGTCAGATACTTGGCTGCCTGCAAAACAAGGTACAGATAGTGCCCTTACAATGGCAATGGGACATGTAATATTAAAAGAATTCCATGTTGAAAAACAAACTGAGTACTTTACTGAATATTGCCGTGATAATACAGATATGCCATTCCTTGTAATGCTTGAAAAAACAGAAGGTGGATATAAGACTGCTCGTAACTTGCGTTCATCTGATTTAGTTGATTCACTAGAAAGAAAAAATTCAGATTGGAAACCTGTTCTTATTGATGAAAATACAAATGAAGTAGTTGTTCCAAATGGTACAATCGGTTCTCGTTGGGATGATAGTGGCAAGTGGAACTTAGAATCTAAAAATGCGGACACTGGTGCAAACATTAAACCTAAAATGTCATTAAAAGGTGAAAAAGAAATTATTAAAGTTGCGTTCCCATACTTTGGTGGACAAGAACACGAACACGGATTATTTCCAAACACTGCACACGATAATGTATTGTTCCGCAATATTCCTGTAAAGAAAATAAAAACTAAGGACGGTGAAATACTTGTTGCCACTGTTTTTGATTTAATGCTTGCCAACTACGGTGTTGATAATGGACACGGCGGTAATAATGTTGCCACATCATTAAATGTCAATGTTCCATACACTCCTAAATGGCAAGAAGCTATTACTGGGGTTGATGCTGACTTAGTTACAAAAATTGCTCGTGAGTTTGCTGATAATGCGGCTCGTACGCATGGTCGTTCAATGATTATTGTTGGTGCAGCAGTTAACCATTGGTATCATATGGATATGATTTATCGTGGCATTATGAATATGTTAATATTTTGTGGTTGCGTTGGTAAATCTGGCGGAGGGTGGGCACACTATGTTGGACAAGAAAAACTTCGCCCACAAACTGGGTGGACACCACTAGCATTTGGTCTGGATTGGTCAAGACCACCACGCCAGATGAACGGTACATCATTCTTCTACGCTCACTCTAACCAATGGCGTTATGAACATGTTGGAACTAATGACATTTTATCACCACTTGCGAACAAAGAAAAATGGAAAGGCATGACCTTAATTGACTGTAATGCTAAATCTGAAAGATTAGGGTGGTTGCCAAGCGCACCGCAATTCAAAACAAATCCATTACAAATTTCAAAAGATGCTAAAGAAGCAAACATACCTGTTGCAGATTACATAGTGAACAATCTGAAATCAGGTAAATTAGAAATGTCTTGTGATGACCCTGATCACCCAAATAATTTTCCTCGTAATATATTTATTTGGCGATCTAACTTATTGGGCTCATCAGGTAAAGGGCACGAATATATGCTTAAACATTTGTTAGGTACATCAAATGGCGTATTAGGTGAGCCGCTGGAAAGTGCTAAGCCAAAAGAAGTTAAATGGCACAAAGAAGCACCGGAGGGCAAGCTTGATCTTGTGGTAACATTAGATTTCCGTATGTCTACAACATGCGTGTATTCAGATATCGTTCTTCCAAGTGCGTCTTGGTATGAAAAGAATGATTTAAACACATCTGATATGCACCCATTCATTCACCCATTATCAAAAGCTGTTGACCCTGTATGGGAAAGCCGTAGCGATTGGGACATATTTAAAGGACTGTCTAAGAAATTTTCCGAAGTATCAATTGGACATCTTGAGATTGAAGATGATGTAGTTAGCGTACCTATCTTGCACGATACACCAGGCGAAATGGCACAGCCGATTGAGGTAAGAGATTGGAGATACGGCGAATGCGATCCAATTCCAGGGAAAACAATGCCTAATCTTGTTCATGTTGAACGGGACTACCCTAATACTTACAAGAAATTTACTTCCATTGGGCCAAAATTAGAAGAACTAGGCAATAGTGGTAAAGGTATTGGGTGGAACACTGAAAAAGAAGTTAAATTCTTAGGTGAACTAAACGGAATAGTCCGTGACAAAGGTATTTCAAAAGGTCGCCCTAAAATAGACACTGATATCGATGCAGCAGAAATGATTTTATCACTTGCACCAGAAACAAATGGTCAAGTAGCGGTAAAAGCGTGGGCAGCACTTGGTAAAATCACTGGCCGTGAACATACTCATCTTGCATTGCCAAAAGAAGATGAAAAAATACGCTTTCGTGATATTCAAGCACAGCCTAGGAAAATTATTTCTTCGCCTACTTGGTCAGGTCTAGAAGATGAGCATGTAAGCTACAATGCTTGTTATACAAATGTTCACGAGCGTATTCCGTGGAGAACACTAACAGGTCGTCAAACACTGTATCAAGATCATGAATGGATGCGTGACTTTGGTGAAGCACTAGTTGTTTACAAGCCACCAGTTAATCTAAACACGGTTCATTCTGCCCTGGAAAAATTTAGTGGTGATGATGATTATGTTGTACTTAATTTTGTAACCCCTCATCAAAAATGGGGTATTCATTCAACATATTCTGATAACTTGCTAATGTTAACATTAAATCGCGGTGGTCCAGTAATATGGATGAGTGAGATTGATGCGAAAAAAGCTGGTATTGAAGATAATGATTGGATTGAAGCATACAATACAAATGGTGCAATTATGGCAAGAGCCGTAGTTTCCCAGCGTATTCCAGAAGGTCTATCATTAATGTATCACGCACAAGAAAAGACAATGAACACTCCGATGAGTCCGACAACAAAGACTCGTGGTGGTATTCATAACTCTGTAACCCGTACTATTACTAAGCCTACACATATGATTGGTGGTTATGTACAATTATCGTATGGTTTTAATTATTATGGTACAGTTGGTTCTAACCGTGATGAATTTGTAATTATCCGTAAAGTTGACAAAGTAGCTTGGGATAAAGCATCATTAGAAAAGCAAAGATAG

Transcript

WZF232260.1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00384	Molybdopterin	Molybdopterin oxidoreductase	Family	Interproscan
PF01568	Molydop_binding	Molydopterin dinucleotide binding domain	Domain	Interproscan
PF14710	Nitr_red_alph_N	Respiratory nitrate reductase alpha N-terminal	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006468	Family	Nitrate reductase, alpha subunit	Interproscan
IPR006655	Conserved_site	Molybdopterin oxidoreductase, prokaryotic, conserved site	Interproscan
IPR006656	Domain	Molybdopterin oxidoreductase	Interproscan
IPR006657	Domain	Molybdopterin dinucleotide-binding domain	Interproscan
IPR006963	Domain	Molybdopterin oxidoreductase, 4Fe-4S domain	Interproscan
IPR009010	Homologous_superfamily	Aspartate decarboxylase-like domain superfamily	Interproscan
IPR027467	Binding_site	Molybdopterin oxidoreductase, molybdopterin cofactor binding site	Interproscan
IPR028189	Domain	Nitrate reductase, alpha subunit, N-terminal	Interproscan
IPR037943	Domain	Nitrate reductase alpha subunit-like, MopB domain	Interproscan
IPR044906	Homologous_superfamily	Nitrate reductase, alpha subunit, N-terminal domain superfamily	Interproscan
IPR050123	Family	Prokaryotic molybdopterin-containing oxidoreductase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43105	RESPIRATORY NITRATE REDUCTASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008940	Molecular Function	nitrate reductase activity	Interproscan
GO:0009061	Biological Process	anaerobic respiration	Interproscan
GO:0009325	Cellular Component	nitrate reductase complex	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan
GO:0042126	Biological Process	nitrate metabolic process	Interproscan
GO:0043546	Molecular Function	molybdopterin cofactor binding	Interproscan
GO:0051539	Molecular Function	4 iron, 4 sulfur cluster binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-