Gene detail

Detailed information of WZF232090 in Chaetoderma shenloong Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
WZF232090	THIAMINE PYROPHOSPHATE ENZYMES	HiC_scaffold_1	4338242	4341332	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

WZF232090.1

ATGACACAGAAAATAATGACTGGTGCAGACATTGTATTAAAGGCGTTAGTTGACCAAGGGGTGGATATTATCTTTGGTTATCCTGGGGGTGCGGTTTTACCTATATATGATGCATTATACGATCACCCAAAAATTAAACATATTTTGGTTCGCCACGAACAAGCTGCACTTCACGCCGCTGAAGGTTATGCCCGTTCAACTGGTAAGGTTGGTGTGGCATTAGTAACATCTGGCCCTGGTGCAACAAATGCTGTTACTGGTTTAACAGATGCATTGCTTGATTCAATTCCAATTGTTTGTTTAACAGGGCAAGTTCCGACTCACCTTATTGGTACAGATTCTTTTCAAGAGGCCGACATAATTGGCATTACGCGTTCGTGTACGAAGTCTAATTACTTAGTGCGGGATAAGGAAAAATTAGCAGAAATTATGCACGAAGCATTTTATGTTGCTAGGACAGGTCGCCCAGGTCCTGTGGTAATTGATTTACCGAAAGACATCCAATTTGCTGAAGCATCATATATGCCACCCGATAAATATGAACACCGTTCTTATTTTCCACAAACAAAAGGCGATGCTGGTGCAATTAAAGTTGCAGCACAAATGTTAATGTCTGCGAAAAAGCCTATTATATATGGTGGTGGTGGGTTAATTAATTCAGGTAAAAAAGCTTGTGCTTTATTAAAAGAGTTAACAGAAGCTTTAAATACTCCTACTACACTTACACTTATGGGATTAGGTGCATTAGATGCTTACCACCCAAATTTTTTAGGTATGCTAGGTATGCACGGTACAGTAGAGGCAAATATTGCAATGCACGACTGTGATGTGATGCTTGCAGTGGGGTCTCGATTTGATGACCGTGTAACTGGTCGCCCTGATGCATTTAGTCCAAATTCTAAAAAAATTCATGTTGATATAGACGCATCAAGTATTAACAAATGTATTTCTATTGATGTTGGTATTGTTGAAGACATAATTAATATTATTAAGATTGAGAAACATACCCCCAATAATAAAGAGTTGGATATTTGGTGGGCTGAAATTAATGCTAATCGTGCAATAAATTGCCTTGGATATAAAGAAAATAAAAATGTTATTGTTCCACAACACGCACTTACAAGGTTAAATGAATTGTCTGAAAAATCAGGAAAAGATGTTCGTATTATTACTGAAGTTGGGCAACATCAAATGTGGACAGCACAATATATGAAATTTCAAGAGCCTAATAAATTTATGACATCTGGTGGACTTGGTACAATGGGTTATGGTTTCCCATCAGCGGTTGGCGTTCAACTTGCCAACCCTGAAGCACTTACAATTTGTATTGCAGGTGATGCTAGTATTCAAATGAATATTCAAGAGATGTCAACGGTTTCTCAATATAGATTGCCAGTTAAAATTTTCATTCTTAATAATGAATGGATGGGAATGGTTCGTCAGTGGCAAGAGCTTCTGCACGATGAGAGATATTCCAACACATATACGGAAAGTATGCCTGATTTTATGAAATTGGCAGATGCTTATGGTTGGAAGGGAATTCGTATTGAAAAACCAAAGGACTTAGATAAAGGTATTCAAGAGATGATAAATTACGATGGTCCTGTAATTGTTGATTGCCGAATTGAAAAATGTGAAAATTGCTTACCAATGATTCTTAGTGGTGCACCACATAACGAAATGATTTTATCTGTAACAAGTGATGCCATAGGTGAAGATGGCAAGAGAATGGTATAGGGGGAAACACAATGACAAATAATAATGAAACTTCTAAATCAGCATACATTCTTACAACAAAAGAAGAAATTATTGAACGACATACTTTTGCTGTAATAGTGGATAACCGTTCAGGAATATTAGCTCGTGTAGTTGGAATGTTTTCAGCTAGGGGATATAATATTGAAAGCTTAACTGTTGCACCAATTGATGCTAATAAAAAGCGTTCACGCATAAACATTGTTACAACGGGAACGGCACATACAATTGCACAAATTAAAGCACAACTAACACGCATTGTTGCTGTTAACTCTGTTGCTAATATTACAGAAGAAGTTCATATTGAAAAAGAAATTGCCCTTATTAGAGTTAAGGCAACTAGTGAACAGCGAGCCGAGGCAATTCGCCTTGCGGAAGTATTTAAAGTAGAGGTTGTTGACGCAACAGCAGAAACTTTTATGTTTATGATAGTTGGTGATAACCGCAGGGTGATTCAATTTATTGATTTAATGAGAACTTTGGGCGATATAGAAGTTGCTCGCTCAGGAGTAGTAGCAATGTCTTGTGGTAGTGAGATTTTAAAAGTATAGTGTCTACATAAAGTAAATATACCAGTTTGAAAGGGAAAAAATGCAAGTATATTATGATAAGGATTGTAAGGAACAGTTAATCAAAGATAAAAAGGTTGCGATTATTGGCTATGGCTCACAAGGTCATGCACATGCTCAAAATCTGCGTGATTCAGGAGTGGAAGGTATTATCATTGCTTTGCGTGAAAGCTCTGCAACTCGCAAAAAAGTTGAAGACGCAGGATTTACTTGTATGACACCTACTGAAGCAGCAAAAGTTGCTGATGTAATGATGATTTTAGCACCTGATGAACACCAAGCAGATATTTATTCAGTTGAAATTAACGATAATTTAAAAGAAGGTGCTACTCTTGCATTTGCCCACGGATTAAACATTCATTTTGGTTTAATTAAACCACGCAATGACATTGATGTAATAATGGTTGCACCAAAAGGTCCTGGACATACGGTTCGTGGCGAATACTTAAAAGGTGGCGGTGTTCCAACCCTTATCGCGGTTCATCAGGACGCATCAGGTTTTGCAAAAGAAATTGCACTTTCATATGCATCAGCAAATGGTGGTGGTAAAGGCGGTATTATTGAAACTGACTTTAAAGAAGAATGTGAAACAGATTTATTTGGTGAACAAGCCGTGTTATGTGGTGGATTATCGGAACTAATTAAAACAGGTTATGAAGTATTGGTTGAGGCAGGATACGCCCCTGAAATGGCATATTTTGAATGCTTACATGAAACAAAATTAATTGTTGATTTAATGTACGAAG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00205	TPP_enzyme_M	Thiamine pyrophosphate enzyme, central domain	Domain	Interproscan
PF02775	TPP_enzyme_C	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain	Domain	Interproscan
PF02776	TPP_enzyme_N	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000399	Conserved_site	TPP-binding enzyme, conserved site	Interproscan
IPR011766	Domain	Thiamine pyrophosphate enzyme, TPP-binding	Interproscan
IPR012000	Domain	Thiamine pyrophosphate enzyme, central domain	Interproscan
IPR012001	Domain	Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain	Interproscan
IPR012846	Family	Acetolactate synthase, large subunit, biosynthetic	Interproscan
IPR029035	Homologous_superfamily	DHS-like NAD/FAD-binding domain superfamily	Interproscan
IPR029061	Homologous_superfamily	Thiamin diphosphate-binding fold	Interproscan
IPR039368	Domain	Acetolactate synthase large subunit, TPP binding domain	Interproscan
IPR045229	Family	Thiamine pyrophosphate enzyme	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR18968	THIAMINE PYROPHOSPHATE ENZYMES	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000287	Molecular Function	magnesium ion binding	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0003984	Molecular Function	acetolactate synthase activity	Interproscan
GO:0005948	Cellular Component	acetolactate synthase complex	Interproscan
GO:0009082	Biological Process	branched-chain amino acid biosynthetic process	Interproscan
GO:0009097	Biological Process	isoleucine biosynthetic process	Interproscan
GO:0009099	Biological Process	L-valine biosynthetic process	Interproscan
GO:0030976	Molecular Function	thiamine pyrophosphate binding	Interproscan
GO:0050660	Molecular Function	flavin adenine dinucleotide binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-