Gene detail

Detailed information of WZF223630 in Chaetoderma shenloong Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
WZF223630	ULP_PROTEASE DOMAIN-CONTAINING PROTEIN	chr1	145061647	145112657	-

Gene Structure

More details in Jbrowse Sequence

CDS

WZF223630.1

ATGGCTGAATTACCAGAGACATTTTGTTCAGTTGGACGTCTCACTGATGATAAATGTCATAAGTTTACGGATAAATGCTCTGTAAATGATGTTGTACAATTGACGGCTACAGATAAAACATTTGTTGCAATGAGAAGCGGCCAGAGTGAGGATAGTTTAGAAACAGTGTGCTGTTGCCACAAGAAACACTATCTGCATATATTCCCGATGATGAAGCAGAACACTTCCCTAAAAGTTCACAAAAAGCTTATTAAAAAGGGACTAGTTAATATAGATCAAGAAATTGTGGCATTAATACAGTCGAAAACTAGAGAGAGAAAACAACCTGGCCAAAAGATTTGCCATCATTGTTTGCAGAAAATTAATAACCTGACAGATTGTAGTGACAGTGAACCGGAATCAATGGCCATAGCAGATACTTTGTACAGTAATGCTGAATGCCTCAACTCTAGTTTCTCAGCAGTTGGAGTTTCTCCCCTAAAGAGTGTCCATTCAGAAAGGAAAGTATCATATGGTAAACGAAAAATCAAACAAATGGCAGAAGCAACAACAAGTCACGTGGCATCCCACCTAGGTTTTCCACCTAATAAATTAGTTGCTGACACTTCACAAACTGAATGTACATGTGATTCTAAGTTAGATGTGGACTACTTGGTATCGAACATGAATGAAAAACTGTCTGTGTCATCACGAAATCAAAAGATACAAGTATTGACTATTACACCTAAATCATGGTCGATAGATAAAACTGTTCAAGTTTTTCAGGCATGTGGTGTTACACGTTATATGGTGAAACAAGCCAGACAACTTGCGCAGAATGATGGAATACTCGCTGATCGTGAAACCTTTAAAAGAAATAAGCTTGATCAGCATACACTAGATAGTGTTATTAACTACTACCAAGATGATACTGTATCTAGACTATTACCCGGGAAAAGTGATTTTGTTACTATAAGAATTTGTGGTACCAAAGAACATAAGCAAAAACGGCTAATCCTGACAAATTTGAAGGAAGTACATGCTAATTTCAAAACAGAAACTGGACTTAAAATTGGTTTCTCTAAATTTGTTGAGTTAAGACCCAAATGGTGTGTAACTGTTTCTTCTAGCGGCAGCCACAATGTTTGTGTATGCGAAAAACACCAAAATGTAAAGTTTATGGTGGATGTTATCTCTGAAGACTATCATAACCTAATTGACAAATCTGTATGTGACAGTAGTTCTAGAAATTGCATGCTGCAACGATGTGAAAAGTGTCCAGGAACTGCATTTCTCAAAACTTACTTAGAGCAAGACCTTTACGAGCACATGGATGAGGATGACATCATTAAATTCAATGAATGGGTATCCACAGACCGAATTGAAATCATGCGCCGAGAAGTATCAGTTGAAGATTTTATTTCTATATTATGTCAACGGATCCAAGAATTAACACCACATTCCTTCATAGCGAAATCTCAAAGTGAATTCTTGAAAGCGTGCAAACATGATTTAGATGACACTACTGCCATTGTTGTTCTCGACTTTGCTGAAAATGACAGCATTATTGTGCAAGATTGTGTACAGGGATTTTATTGGAACAATTCTCAAGTCACGATACATCCTTTGGCATTTTATGTTAAGGCTTATGGAAAGTTGAATGAAGAAAATGTATGCTTCATCTCTGAGTGTCTGAAACACGAAACAAATGCTGTGTACTGTTTTCAGGAGATTTTTACAAGATATTTGAAGGAAAAGTATCCCAATATTCATATAATTAAATACTTTAGTGATGGGTGTGCAGGACAATACAAGAACTTCAAAAACTTTATTAATGTCTACCATCATTATTCAGATTTTGATATTAAGGCAGAATGGCATTTCTTTGCTACCAGCCATGGTAAAGGTGTTTGCGACGGTATCGGTGGCACAGTGAAGCGCTTAGCCGCAAGGGCTAGTCTGCAAACAGCGCTTATACGAAATGCTAGTGAATTGTATGAATTCAGCCAACAGAACATAAGCAAGATCAAGTTCTTCTTAGTTAGTAAAGATGAGATCCAGAGCCATCATACAATGTTGGAAGAGCGGTATCTCCTTGCCAAAACAGTGCAAGGAACCAGGTCATTCCATTCGTTTGTTCCAAATGACACTAACTCTATCACAGTAAAGCGAATTTCAACTGATGATGTTTCATACACTCGGTCATTTTCTAACACACAACCTGACTCCCTCTTAGCGCTCCAGCCGCTGGAGAGTGGAAAGGAAAGTACAGATTTAATTCATGAAAATCTTGCGCAACTGGCTAAGGAGAACAATGTCAACTTACAGTGGATCCCCTCACATTGTGGCATATTAGGAAATGGCAAAGCTGATCAACTGGCTAAGGAAGGGTCAAATAAAGAACAATTCAACCGCGAGGTTGACTTTGAAGAACTGAAGCATATCATTAAAGCCACAAGAACCACCAGCAGGCAGCATAATGATGCCATACACGGCCTCAGTAGGGAGGATCAGACATGTATCTTCAGATTGAGGACTGGTCACAATCTTCTCAATGCACATCTTCACCATCTCAAGATTACAGATTCTGCACTTTGTGAGTGTCAGCAGGCAGAAGAAACAGCAGAACATCTCTTGCAGCACTGCCAGAGATATGAACAGGCTAGAAGAAGCTACTGGCCTATTGAAGAATTAATTGCCAGAGTGGAACAGTTGACGTCTCATGCGACCCAGCTAAGCAATATAATAAAAAAATCACAGAAACCACAGATATCTAATAAGGAGAAGAATCAAAAGAAGTTTGATTTTAGCAAACATAATACGAGGCATATTGCCCTGAAGGTTGCCTATGTGGGCTGGGATTATCATGGATTCACAGTCCAGGAGGAGTCTGAGAAAACCATAGAAGCAGCTTTATTTGAAGCCCTCCTCAAAACAAAGCTAATTGAATCCAGAGAAACATCAGACTACCATCGGTGTGGGAGAACAGATAAAGGTGTTAGCTCATTTGGTCAGGTGATTTCCATTGATGTAAGAAGTAATCTGAGCGAGGGACTTGGTGTGAAGATTCGACAGAATGATGGCCAAACTCATAAGAGAAAAGCGAATGACATGCCCGAGATCAGATATGCTCATATACTTAATAGAGCCCTTCCTCCCGAGGTGCGTGTGCTGGCCTGGGCACCTGTGGATGCTGAATTCAGTGCAAGGTTCAATTGTTTAAGCAGAACATACAAGTATTTTTTCCCTGTTGGAAGATTGAACATTGAGAAAATGTCAGAAGCAGCATCGCACTTAATCGGCGAACACGATTACAGAAATTTCTGTAAAATGGATATAGCTAATGGCATCACACACTTCATCCGAAGAATACACGCTGTGAATTTGAAAAAAGGAAATATACGAGCTGATGAATACGACATGTGTGAGTTGACGATAGTTGGACGGTCGTTTCTCTGGCATCAGATCAGGTGTATTGTTTCACTGCTTCTCCTAATCGGCCAGGGAAAAGAGAATCCACAGCTTGTTGAGGACCTACTGGATGTGAAGAAAAACCCACGTAAACCGCAATACACAATGGCATCAGAATTGCCGCTGAATCTGTATGATTGCCAATTCGACAATCTTCAATGGACTTCTGATGAAGAATGTCACAGATTTATTATCCAAGATGTACAAGAAATGTGGGCAAAACACGCGGTCAAGGCCGCGATGCTGCTGAGCATGCTGGGAGATTTAGAAGCGACAATACCATTAGAGAAAGACCCCACGACGAAGAAAGGACATAAATTATTGAGGAAGAGACCTCGATCCGATGAGCATGATTTAACAAACTGGATCATCCCCGGTTCACGGCCACACAGCCATATCAACTTGTTTGCTAGGCCAATGTGTGAAAGTTTTGAAAAGAGGATGACACAGAATGCCAAGAGAAGAAGAGTTCAACCTGCGGGAGATGTGGATAGTGAGAGTAGTAATTCTAGTGAAAGCAGCACTCCATCTACAGTATGTCAACCTGTGGGAGGAGGAGATAATGATTGTAGCAAGCCATCTACAGTATGTGAATGTTCTGAGATGGTCAGTCCTATCACTGGACACGACCATGCTGACCATGTTCATGGTATAAGTGGTGAGACGTGTGATTTAATAACAACGTATCCAAATAGTGATGAGAGAACTATAGATGAGGCTACACTGACCAGTGGTCAACTAGAGAAAAATTCAATACCCTCCCATGAACAGTCGGTGAATAATGATTGTGATTTAGACGCCGCTAGTAAAACATATGATGCAACAATACTGTGTGATCAAGAACCTTCCCATATACCATCAACAAATACATTGTAG

Transcript

WZF223630.1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01416	PseudoU_synth_1	tRNA pseudouridine synthase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001406	Family	Pseudouridine synthase I, TruA	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR020094	Homologous_superfamily	Pseudouridine synthase TruA/RsuA/RluB/E/F, N-terminal	Interproscan
IPR020095	Homologous_superfamily	Pseudouridine synthase I, TruA, C-terminal	Interproscan
IPR020097	Domain	Pseudouridine synthase I, TruA, alpha/beta domain	Interproscan
IPR020103	Homologous_superfamily	Pseudouridine synthase, catalytic domain superfamily	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR041707	Family	Pseudouridine synthase Pus3-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46601	ULP_PROTEASE DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0001522	Biological Process	pseudouridine synthesis	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0009451	Biological Process	RNA modification	Interproscan
GO:0009982	Molecular Function	pseudouridine synthase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-