Gene detail

Detailed information of WZF219780 in Chaetoderma shenloong Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
WZF219780	GLUTAMATE SEMIALDEHYDE DEHYDROGENASE	chr11	229785604	229840517	+

Gene Structure

More details in Jbrowse Sequence

CDS

WZF219780.1

ATGAGTATTGTAGTTACAAGTGGGATTCATCCAGTCATCAGAAACTCTAAACGAATTCACGCTCTTAAAACCCTCAGCAGATTTTACAGAACTGGGTGCCTAAATCCGGCAACTAGATATACACATGTTTCATTAGTTCGAACTGGTAGAACATTCAGATATGATTGTTTGTCGAGAGGGATTATTACGGTATTTCTAAATTCAGGATGTGGACGCAAAACCTACTCATTGGCAGGTTATAGTTCTGAAAGGTCATACAGGGCAACGACGACTGTATTTACTAAACATGTGCTCAACAATCCGGTGAAAAGAGGACGAATCTTAACTAGAAATGACTTGACAACAGCGCGTCGGATTGTCGTTAAACTTGGTAGTGCGGTTATCACTCGGGAGGATGAATGCGGACTTGCTTTGGGCAGACTGGCATCTATCGTTGAACAGGTGTCTGAGCTCCAGAACCAGGGGAAGGAGATGTTGGTGGTTACAAGTGGTGCCATAGCGTTTGGAAAACAGAAACTTCGCCAGGAGTCACTGATGTCAATGAGCGTCAGACAGACACTACACGATAAGAAAGGTGTACCATTGATCGAGCCCCGTGCCTGTGCAGCTACCGGCCAGAGCGGGCTTATGTCACTCTATGACGCTATGTTTCTGCAGTATGGCGTAAAAACTGCACAGGTTCTCGTGACAAAGCCGGACTTTCAGAATGACGTGAGCCGAAGGAATCTGCGCAGTACCATGTTGGAGCTACTAAGGCTGAACCTCGTCCCTATAGTGAATGCTAATGACGCGGTGGCACCACCCCCTGAAGCGGACAAGGATCTAACTGGAGTGATCAGTCTAAAAGACAATGACAGTCTGGCAGCACGTTTATCTGTGGAAATAGATGCAGATCTGCTGATTCTGATGTCAGATGTTGATGGCCTCTACACCAGCCCACCAGGGACATATGGCTCACGGTTACTCAGCACTTATAATCCTGCAGATCCATCAAACAGTATCATCTATGGCGAGAAGTCGCGCGTGGGCATGGGCGGAATGGATTCAAAGACAGCCTTACTACAACATCCGCCCACAAAAGCTGCTAGTTGGGCTCTGGGGCAGGGAATATCTGTGGTGATATGCAATGGTATGGAGGACCAATCAATTGTAAACATCATACGGGGTCGAAAAGTGGGTACATTATTCACAACTGCGGACAGCATGGGAACAGCAGTTGAAAAACAGGCATTACAAGCTCGTGAAGGAAGCCGTGATCTTCAAGGACTATCAGCAGAGGTGAGGGCATTGATCATCAAAAACTTGGCTGACAGTCTGATAGAAAAGAAATCTCACATTCTGGCTGCTAATCAGAGAGATATAGACATCGCCTATCAAAGCGGCGTATCCGGGCCATTATTGAGTCGGCTTGCCCTGAGTGAATCTAAGCTACACACGCTCCATGAGGGACTGTACCAAATTGCGGATAGTTCACATACAAATGTGGGTCGTGTTCTGAAGAGAACCCAGGTAGCTGAGAACCTGTCATTATGCCAAGTCACGGTGCCCATTGGTGTGCTTCTCGTCATCTTTGAGGCCAGACCAGACTGTTTACCACAGGTTGCGGCATTGGCTATTAGCAGTGCTAATGGCTTATTACTGAAAGGTGGGAAAGAGGCGTCACATAGTAACAAGTTACTTCATGAGCTTGTTCAGGATGCTCTCAGACCACATGTAGCGCCGGAGACCGTGGGACTGGTTAGTCGCAGAGAAGACATTGATGACTTGTTACAATTGAACGAGTACATAGACCTGGTTATCCCTCGTGGTTCACAGCAGCTTGTGAGACGGATACAATCAATAAGTGCTGGTATACCTGTCCTGGGCCACAGCGAGGGCGTATGTCATGTATATGTGAATAAGGACGCAGATCCAGATATGGCAATTAGAATTGTTCAAGACTCTAAATGTGATTATCCTGCTGCGTGTAATGCTATGGAAACGCTTCTGGTTGATGAATCGCTCTTGCAGACAGAACTATTTGACAATATTTGTGGTATGCTTAAAGATAACCAGGTTCAAATTCATGCAGGACCACGACTATCTCGACTGCTGAAGTTTGGGCCACCTCGTGCTAAAAGTTTGAATATTGAATATGGTGCACTGGAATGCACTATTGAAGTAGTGGATGGTGTGGAGGGCGCCATTAGCCACATACATTCACATGGCAGCGCACATACAGATGTAATTGTCACCAATAATGAGCCGGTAGCTCAGGAGTTTTTACGTCAAGTAGATAGTGCCTGTGTCTTTCATAATGTCAGTTCTCGTTTTTCTGATGGATATAGATTTGGCCTCGGTGCGGAAGTAGGCATTAGCACTAGTCGGATTCACGCACGTGGACCTGTTGGTGTTGAGGGTTTACTCACAACAAAATGGCTGCTCCAGGGAGATGGTCAATGTGTTGCGGACTTCACCGACGGAGGGCAGCAGTACTTACATCAGATACTGCCGACCAACAATTAG

Transcript

WZF219780.1

TTGATTTTCGTTCAGCAGCTTTAGATCTAACGTTTCATTATTTTATTATTGACAGTGTCGGCAACTAGTTTATGAATTTGATATACCGTCACAAAGCAAACAGCTATAAATCATGATAAATCTGATGATATGGTCACGCTCCACTGTTTTATGACTAGGAATTTCCTAGAGTTCGACGAGTTACACAGAACTACAATATTAATGTTATTCATTTCTAAATGGGTGCTGAGCAGTATGTTAAAAATTAGTCAAATGCGCTGGCTAGATTGACCATACAGCTCTCTACCATGCGCAACCTGCGCCACTTTCCAAGCTTTGATATGCAATTCACAGCACGTCAGGACACGTATTACAATCTACACTACGTGCCATAAGTATTTGTATAAAGAGGTATTGTTATAGTTGAATATAAGTTTGCGGTTACTTAATCATGCACAACAACAGAAGATAGCAAAAAGCTTATATTGCTTCAAAATGAGTATTGTAGTTACAAGTGGGATTCATCCAGTCATCAGAAACTCTAAACGAATTCACGCTCTTAAAACCCTCAGCAGATTTTACAGAACTGGGTGCCTAAATCCGGCAACTAGATATACACATGTTTCATTAGTTCGAACTGGTAGAACATTCAGATATGATTGTTTGTCGAGAGGGATTATTACGGTATTTCTAAATTCAGGATGTGGACGCAAAACCTACTCATTGGCAGGTTATAGTTCTGAAAGGTCATACAGGGCAACGACGACTGTATTTACTAAACATGTGCTCAACAATCCGGTGAAAAGAGGACGAATCTTAACTAGAAATGACTTGACAACAGCGCGTCGGATTGTCGTTAAACTTGGTAGTGCGGTTATCACTCGGGAGGATGAATGCGGACTTGCTTTGGGCAGACTGGCATCTATCGTTGAACAGGTGTCTGAGCTCCAGAACCAGGGGAAGGAGATGTTGGTGGTTACAAGTGGTGCCATAGCGTTTGGAAAACAGAAACTTCGCCAGGAGTCACTGATGTCAATGAGCGTCAGACAGACACTACACGATAAGAAAGGTGTACCATTGATCGAGCCCCGTGCCTGTGCAGCTACCGGCCAGAGCGGGCTTATGTCACTCTATGACGCTATGTTTCTGCAGTATGGCGTAAAAACTGCACAGGTTCTCGTGACAAAGCCGGACTTTCAGAATGACGTGAGCCGAAGGAATCTGCGCAGTACCATGTTGGAGCTACTAAGGCTGAACCTCGTCCCTATAGTGAATGCTAATGACGCGGTGGCACCACCCCCTGAAGCGGACAAGGATCTAACTGGAGTGATCAGTCTAAAAGACAATGACAGTCTGGCAGCACGTTTATCTGTGGAAATAGATGCAGATCTGCTGATTCTGATGTCAGATGTTGATGGCCTCTACACCAGCCCACCAGGGACATATGGCTCACGGTTACTCAGCACTTATAATCCTGCAGATCCATCAAACAGTATCATCTATGGCGAGAAGTCGCGCGTGGGCATGGGCGGAATGGATTCAAAGACAGCCTTACTACAACATCCGCCCACAAAAGCTGCTAGTTGGGCTCTGGGGCAGGGAATATCTGTGGTGATATGCAATGGTATGGAGGACCAATCAATTGTAAACATCATACGGGGTCGAAAAGTGGGTACATTATTCACAACTGCGGACAGCATGGGAACAGCAGTTGAAAAACAGGCATTACAAGCTCGTGAAGGAAGCCGTGATCTTCAAGGACTATCAGCAGAGGTGAGGGCATTGATCATCAAAAACTTGGCTGACAGTCTGATAGAAAAGAAATCTCACATTCTGGCTGCTAATCAGAGAGATATAGACATCGCCTATCAAAGCGGCGTATCCGGGCCATTATTGAGTCGGCTTGCCCTGAGTGAATCTAAGCTACACACGCTCCATGAGGGACTGTACCAAATTGCGGATAGTTCACATACAAATGTGGGTCGTGTTCTGAAGAGAACCCAGGTAGCTGAGAACCTGTCATTATGCCAAGTCACGGTGCCCATTGGTGTGCTTCTCGTCATCTTTGAGGCCAGACCAGACTGTTTACCACAGGTTGCGGCATTGGCTATTAGCAGTGCTAATGGCTTATTACTGAAAGGTGGGAAAGAGGCGTCACATAGTAACAAGTTACTTCATGAGCTTGTTCAGGATGCTCTCAGACCACATGTAGCGCCGGAGACCGTGGGACTGGTTAGTCGCAGAGAAGACATTGATGACTTGTTACAATTGAACGAGTACATAGACCTGGTTATCCCTCGTGGTTCACAGCAGCTTGTGAGACGGATACAATCAATAAGTGCTGGTATACCTGTCCTGGGCCACAGCGAGGGCGTATGTCATGTATATGTGAATAAGGACGCAGATCCAGATATGGCAATTAGAATTGTTCAAGACTCTAAATGTGATTATCCTGCTGCGTGTAATGCTATGGAAACGCTTCTGGTTGATGAATCGCTCTTGCAGACAGAACTATTTGACAATATTTGTGGTATGCTTAAAGATAACCAGGTTCAAATTCATGCAGGACCACGACTATCTCGACTGCTGAAGTTTGGGCCACCTCGTGCTAAAAGTTTGAATATTGAATATGGTGCACTGGAATGCACTATTGAAGTAGTGGATGGTGTGGAGGGCGCCATTAGCCACATACATTCACATGGCAGCGCACATACAGATGTAATTGTCACCAATAATGAGCCGGTAGCTCAGGAGTTTTTACGTCAAGTAGATAGTGCCTGTGTCTTTCATAATGTCAGTTCTCGTTTTTCTGATGGATATAGATTTGGCCTCGGTGCGGAAGTAGGCATTAGCACTAGTCGGATTCACGCACGTGGACCTGTTGGTGTTGAGGGTTTACTCACAACAAAATGGCTGCTCCAGGGAGATGGTCAATGTGTTGCGGACTTCACCGACGGAGGGCAGCAGTACTTACATCAGATACTGCCGACCAACAATTAGTTATTTAATGCTGTCAATCCTAAATGTATGACGTGACATCTTTTTGAGAAGTGGAATAGAAAGATCCATTTCCTGCTATAACCCCGCCGATTCTTAGCTAAGCTCCGCCCACGATTTGCGTGTGTTGGGATAGATTTATATACTTTGAACACTGAATCACCAGAATCCCACTTCCATGGCAAAAGCGAAGCTGTTGAATATAGTGAAACTAATTTGATTGAGACGTACAATTTGTTCACCACATGTGACATAATTGATAATGACGTCATATACTTGAGTGACAGATCGAATCCCTCCATATTGTCCTAA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00171	Aldedh	Aldehyde dehydrogenase family	Family	Interproscan
PF00696	AA_kinase	Amino acid kinase family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000965	Domain	GPR domain	Interproscan
IPR001048	Domain	Aspartate/glutamate/uridylate kinase	Interproscan
IPR001057	Family	Glutamate/acetylglutamate kinase	Interproscan
IPR005715	Family	Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase	Interproscan
IPR005766	Family	Delta l-pyrroline-5-carboxylate synthetase	Interproscan
IPR015590	Domain	Aldehyde dehydrogenase domain	Interproscan
IPR016161	Homologous_superfamily	Aldehyde/histidinol dehydrogenase	Interproscan
IPR016162	Homologous_superfamily	Aldehyde dehydrogenase, N-terminal	Interproscan
IPR016163	Homologous_superfamily	Aldehyde dehydrogenase, C-terminal	Interproscan
IPR020593	Conserved_site	Gamma-glutamyl phosphate reductase GPR, conserved site	Interproscan
IPR036393	Homologous_superfamily	Acetylglutamate kinase-like superfamily	Interproscan
IPR041744	Domain	Bifunctional delta 1-pyrroline-5-carboxylate synthetase, glutamate-5-kinase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11063	GLUTAMATE SEMIALDEHYDE DEHYDROGENASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0004350	Molecular Function	glutamate-5-semialdehyde dehydrogenase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0006561	Biological Process	proline biosynthetic process	Interproscan
GO:0016301	Molecular Function	kinase activity	Interproscan
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan
GO:0016620	Molecular Function	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-