Gene detail

Detailed information of WZF212140 in Chaetoderma shenloong Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
WZF212140	ACETATE--COA LIGASE [ADP-FORMING]	HiC_scaffold_4942	10890	13070	-

Gene Structure

More details in Jbrowse Sequence

CDS

WZF212140.1

ATGGACATCAGTGAATCAATTAAAAAGGCTAAAAAAGCGGGTAAAAAGACTTTGTCAGAATCAGAATCAAAACTGTTTCTTAAAGAATACAAAATTCCGGTAATCAATGAAAAAGTAGTGTTAAATAAAGATGAAGCGGTCAAAGCTGCTGAAGAAATAGGCTTTCCGGTGGTGGTTAAAGGCCTCGGTGCTAAACTGCTCCACAAAACCGAGCTTGGTCTTGTCTACTTGAATTTGACAGATTCTCAGGCGGTTGGAAATGCAGCAATTGCAATATCTGAAAAAGGTGGCGACAAACTTGAAGGCTTTCTGATACAGCCTCAACTTAAAGGAAAAAGGGAGTTTGTTGCAGGCTTGTTCCAGGATAAGCAGTTCGGTCCGGTGGTTATGTTTGGAACAGGCGGCATATTTGCCGAAGCTCTTTCTGATGTCACCTTTAGAATTGCGCCTTTAACGAAAACAGATGCAAAGCAAATGCTCGATGAGATCAAAGCACATTCTCTTCTCGGAAATTTCAGGGGTGAAAATGGCGCTGACCGGGAACGGTTGATTGATTCCTTGCTCGGTCTTTCTCGAATCGGGATGGAGCATCCGGATGTTTCCGAAATTGATATAAACCCTTTAATTATCAATCCTGACGGCAGTGTCTGTGCCGTTGATGCATTGGTTGTGTTGGATGATACAGCAACGAAAGATCAATACCTGCCTGCAGTCGATCCGGTTTCGATACGATCAATATTTTATCCTGATTCCATTGCATTTGTGGGGGCTTCCGCCCAGATAGGCAAATGGGGCTATACATTGGTGATAAACACTGCCAGCGGTGGTTTTAAAGGAAAAATATTTCTTGTAAATCCAAAAGGAGGAACCATTGCAGGTCGTCAGGTTTATAAATCTGTTTCAGAAATTCCGGATAAAATCGATCTGGCTGTTGTTACAATACCTGCTTCAGGGGTGCTGGATTTGATTCCCCAGTTTAAAGAAAAAAATATCAAAAATATGCTCCTTATAACATCCGGCTTTGCTGAAACAGGTGAAAAAGGAAGAACTCTTGAAAAAGATCTTGTAAAAAAAGCCGAGTCTGCCGGAATTCTTGTGCTGGGTCCAAATACAATGGGAATCTGTAATCCTCACGCAGATTTTTTCTGTACCGGTTCCCCTGTACAGCCCATGCCGGGTTCAACGGCGGTCGTTTCCCAGTCCGGAAATATGGGTGTACAGCTGCTTGCCTTTGCGGATCGTCAAGGTATCGGTATTCGGGCTTTTTGTGGGTCAGGTAACGAAGCGATGGTAACAATAGAAGATTTTCTTGATGGTTTCGAAATCGATTCTTTAACCAATACTGTAATGCTTTATATAGAAAGTGTAAAAAGCGGCCGAAGATTTTTTGAAAGTGCAAGACGTTTGGGAAAAAAGAAACCGGTTGTCCTGTTGAAAGGAGGACAGAGTAAAGCGGGAAATAAAGCCGCATCCAGCCACACCGGAGCATTAACAACTGATACAAAAATATTTGATGCTGTATGCCGTCAGACCGGTATTGTTAAAGTTGAACAACCGATGGATCTTCTCGACCTTGCTGCTGCATTTTCATCTTTGCCTCTTCCCAAAGGTAATCGTACGGCAATAATGACCCTTGGCGGTGGGTGGGGAGTTGTAACTGCAGATCTGTGTTCTCAATTCGGTCTTGAAGTTCCGGAACTTTCCCCTGAAATTATAAAACGAATAGACAAAATACTTCCACCTTACTGGAGCAGGTCGAACCCTGTGGATCTGGTGGGAGAAAATGATACTTCGATACCCATGACCGTAATAGAAGAACTTTTAAAATGGGATGGTTGCGATGCTGTTATTAATCTTGGAATACTTGGCAGACGAATTTTCATCAAAAATTTCACAGATTCCGTTCTTCAATCAGACCCGTCTTATTCTTCCGATTTTCTTAAATCTCTTAATGAAAGTATGGCACAGTTTGAAAGTCAATACATCGATCATATTGCAAAGTTAATGGAGATATATAAAAAGCCGGTATTTGGAGTCAGCCTTCTGACGGATGAAAAAGATCAAACTGTCTATAATGTGAAAGACAACTCATTTAAGCCGATATTTTTCCAAACACCGGAAAGGGCTGTAAAGGCATTTTCAAAAATGTATGAATATCAGCGGTTTCTGGATAGAACTTAG

Transcript

WZF212140.1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13380	CoA_binding_2	CoA binding domain	Domain	Interproscan
PF13549	ATP-grasp_5	ATP-grasp domain	Domain	Interproscan
PF13607	Succ_CoA_lig	Succinyl-CoA ligase like flavodoxin domain	Domain	Interproscan
PF19045	Ligase_CoA_2	Ligase-CoA domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003781	Domain	CoA-binding	Interproscan
IPR011761	Domain	ATP-grasp fold	Interproscan
IPR013815	Homologous_superfamily	ATP-grasp fold, subdomain 1	Interproscan
IPR016102	Homologous_superfamily	Succinyl-CoA synthetase-like	Interproscan
IPR032875	Domain	Succinyl-CoA synthetase-like, flavodoxin domain	Interproscan
IPR036291	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR043938	Domain	Ligase-CoA domain	Interproscan
IPR051538	Family	Acyl-CoA Synthetase/Transferase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43334	ACETATE--COA LIGASE [ADP-FORMING]	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0043758	Molecular Function	acetate-CoA ligase (ADP-forming) activity	Interproscan
GO:0046872	Molecular Function	metal ion binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-