Gene detail

Detailed information of WZF166900 in Chaetoderma shenloong Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
WZF166900	CADHERIN-23	chr13	57749373	57892827	-

Gene Structure

More details in Jbrowse Sequence

CDS

WZF166900.1

GTCTCCTCTCAGAGTCGCGTGTGGAAATGGAGCCCTGGCCATCCCATCAGAGGTGGCTGTGCCATCGTATGGCGAGGCTTATCGCCTGAGCTTAAGCTTGTTGACTGTGAAGACGTCCATCAGATTCTGTGCATCAAGCACGCATATGCACCTGAACTACAGCAGAATTACCCAGGTTGTCCAGCAGATTGGTATGGCCATGATGAGTTACATAAATGTGTCTACGTGAAGCACGACGAGGGTACTGGCTTATGTGATTTCATGGACAGTAGGAGGACGATAATCAACGAGAGGCGGCCAGAATACCACGTCGAAAAGGCACTTATATTCAATCTCCTACAGAAATTCAATTACACCATCCAGGTGCCATTGCCAAACACAACACCAATAACACCAGCATCTCCAACTCATGATACATCTTTGGCTTTGCGTGTCCGTCGAGGGGCAACAGCAATGACGAACTGCACCAGTTTCTATGTAAAAGCTAATTCTCAGATTATGCCAGTTCCGTGTCGTATCGGTCTGAATTTTGTGTGTGAAATGCCAATACAAAACTCAGATGTGGATTCTGGATCAGGTGTGGATCCTGGATCAGCACCCACAACCTGCCCTCATACATGGTTCACGGTTCCTGACCTCAGAAAATGTATCTACATCAGTCCATCTCAAGCGATGATAAACTTTAACCAAGCCATGCAGCAGTGTCAGAATTATTTGAGTGGACCAGATGGGCCAATCACAGCGACAGTCTTTCAGGCCATTTCTATTGTTGACATCAGGATCATTCAACAACGACTGCTAGAAGCTGGTAGATTGATCAACAGACAAGTATGGGTGAGCATGTTAACATCATCTGGTGTATCCAGCGTCTTTGAAACGACGGGGCCAACAACAGCAAGAACAACATCAGCAACAATGATGACAAAACCAACAATGACAAAGGCAACATCAACAATATCAACAAGACCAACAGACGCAACAAGAACAACAAATGCACCAAGAACAACAGCAATGACAGGAGCATCAACAACAAGATCAACAGCGACAACACGATCATTAGACAGGACATTGATTCCTTCATATCAATGTCATGCAGTTGGTGTCCATCGACTCCTGTCGATTCCTTGCAGAGCTTTGGCACTTGTTGTGTGTGAATCACCACTATATGCTCATATTTCTGACATTGCCTGCCTGTCAGGCTGGCTCCGGACTAGTGACATCAAGAAATGCTTCTATGTGACCAATATTACAGAGCACTTTGGCGCTGCTTTACAATACTGTAGCAGCCTCGGCTCTAGCTTGCTGACGGCCAGTTCTAAATCGAAGCTTGACATAATTCAGCAAGGAATAATGGAGCTTAAGTTATCATCGGAGAGCCTCGTCTGGGTGAACACGACTTCAGGGATTGCCTTTATGTTTATACCTGACCAAGGATTTCCAATTACTACTACTTCCACTACCACCACTACTACTCAGCCGCAGGTTAATTACAAATGTGTCCGTTTCATTAATAAAAGCATTTTTGTTCCTGTTCCATGTGACGGCCATGCGGTCAGCTTTTGTGAAAGAAGAAGATATGTTTCAGTGCCACAATTCTCTCTATGGGAATATCGTGTTAAAGTTCCTGAGAATCAAGTTTTGGCTGAAATGGTGAGAGTTAAAACTGCAGACTCTCCTTACACCATTGTGTACTCTGTTATAGCTGGTGATGATACACTGCCCAAATTCTCAATAAACAATCGGACCGGTGTAATTTCTGCCATTAAGCTTGACCGTGAACATCAAGACAGTTATACTCTAACTGTTTATGCTAGTTTTGTTGGTAGTCAATCGGGAGGGGCTACCTGCCAGGTCCATGTGAGTGTCCTCGATGTAAATGATAATGTTCCAGTATTTGCCCAGAGTGTATATGAAGCACGGATATTTGAAAATGCAGGAGAAGGTACACAAGTGTTAAGAGTCAAAGCCAGCGATGCTGATTTAGGTCGTTATGCATCTGTGAATTATTCCATTGGAATTGAAGCTAAACGAGTTTTCATGATCAATGCTGGAACTGGTGTCATCAGGATTATTCGTCCTCTCGATCGTGAGATTGAACCAGTATATAGGTTTATGGTAAAAGCCATTGATTACGACTCAAAATCCGCCGCTATTGCTAGCGTCGTAGTAACTGTTCTGGATGTTAACGACAACCAACCCACTTTCCGCAACACTATTAAATATATAAATCTCTCTGAGAGAACGCCTTCAAAGACAAAGATTTTAAGCATGGATGCAGTGGATAGAGATGATGACGGGAATATGACAGATATCGTGTACTCTATTGTTAGTGACTACCCACAGTTCAAGATTAATGCCAAAACTGGTATGATATCAACAGCAACAACAATATCATCGTTGAGACTCCAATCAACGCGCGGTCATTCACCAGTACTTAAGGTCATTGCAACGGATGGTTATCTTCTAACCAGTGCAACGGTGACAATACACGTGATTTTGGGAAGTTCTGCGCTAAAATTCATGACCAAGATGTCCATGTACCACGCTTATCTAGATGAGAATGTTGTAGTCGGCAACATGGCCAGTCAAGTTGCTGCTAAGTATAATAGAATAGACAATGAACGCCTGATTGAGTATGACATTGTAAATGGAAATGAAGACCGAATGTTTGGCATTGACAAGAAAACGGGAAAAATCATTGTCAACAAGACACTGGATTATGAGTACAAGAAACAGTTTCAGCTCACCGTGGAGGCAACTGATACTGGATTTTATGCGTATGCTATGGTGCGAATCCACGTCAAGGATGCCAATGACAATGCCCCAGAGTTTATCACTCCCTGTTACCCTGTCACAGTATCCTTGGGAACCAGACCACCAGCTGTTATCACAAAGATTACAGCCACTGACAAAGATTCTGGAATTAATGGGAAAATACAGTATCGTCTTTCTGGAAATGATAGTAGTCATTTCACTATTGATGAGCACGTCGGTATTGTGCAAGCCCTGATCACCCTAGAAACACCCCATGTATACAAGGTGTTGGTGTTTGCTAGCGATAATGGGAGTCCACAACTGTTCAGTGTTTGTTCGCTGGTCATTAGAGTTGCAGAAACAGACATACAGAGGAACAGTCGTGAAATGTTTGTAAATGCTTATGATCTGACCCGCACTGTGCAGAAGATGAATTGTGACGTCACAGACCGCAACGAGAATGTGCCCGCTTTTCTCACCAAAGACTCTCTTCCTATTAATAACAGTTACCATTCTTCAAATATCGGCATACTGCAAGGATGTTATAGCTGTGAAGTATGGGATCCATTTACAGTGAAACTCAGAACGCCTGCCCAATCCACATGCATATATTTGAACGATCACCTGACCTATCATGGTAAAATTGTGCTTACACTGTTTGCGAGTTCACGGGACATCAAACTATTCAACATGTTACGACAAGTCTCGGGAAGATTTCGTGATCTGCCTCGATATATGGATGCTCTCGTTTTGGGTCATGTGAACGAATTTGTAATAGACGGGAAAACGATTTCTCGAGAAAATGTAGACATTAGTATCACACACCTGTCTAATTTTGGTAATATAGGGATGTTGGTATCTTTTAACATATACGTTAATGTGAGAGGTGATGTTACTCCAGAACTGGATGCATACTTTTATCAGCAGCTGACAAATACCATCCACCATGAAAGTAAAACCCTTAGTAGCAGAGTTAGAGAGGAATATGAGCAAATGCGGCCAATTGTTCCTGTCCAGGGAAGTGTTCGCATCCATAGTACAGCACATTGCTTTGCACAGCAGATTGAGTCTCCTTATGGTGTATATCATGTTACTACGGCACCAATTGGCAGCTCATCAGATAGCATAGAGAAATGCCATCTTCAGAATGGTAATATTGTCCCACAGGCGAGAGCTTTCTGTAATGCATCCTTCACTACCGGAGCATCATGGGTGCTGGAATATAGCATTGCCTGCTCAGTGCTTTCTGTTGAGACATCTGATGCACTGGACTATTACTCAGAGGTTACCGTGACAACAGAAAATGCCCCAGATATTAGCGAGCAGGTTGCGAACCTCACATCAGATGTCCAAGATCTCAGTGCTACGGACGTGAATTCGGTCTCAAACACATTGAAGAATATTGCTGATGTAGACGGGATCGACATAGTGACGGCGGATGACTTTATCAATACAGTCAGTAACATAATGGATGTGGATGATACATTACTTAGTCAAGCCACCAACAATGCTCCAGCCAGTGTCATCGAAAGCCTCGACCGTTACACACAGAATGTCGATCTCGGTAACAAAACTGAATATAAACATGATACAAAGAATCTTGTCGTACGACTGTTTGATATCCACACATCATCATCAAATAGGTTAGCACTGGTGACTGGAATTCAGCTGCTTACTACGAACCAAGCATCAGATCATGGTGGCAAGGCTTGGTCTGAGAATATTAATCTGATCAAACAAGGCAGTGAAGTAGCAGGCTATGGGAACATTGAGGTCTCTCTTGAATTACCACTGGAACTATTTGCATCTTCCACAGGATCGAACCAGACAAGATTATCGTTCACAATCCAGAATGACATCAGTTTGTATGAAAGTCGCAAAGCCATTGGCTCTCCCGCGGAGGATAATTTCAAATTAAACAGTCGTGTCGTGTCTGCATCTCTCGGGAAAGAGAAGATTGAGAATCTTTCTGAGAATATTCGCATTATTTTCCACCCTATTCTGAACATTTCTAAAGAAGCAAAAGTTCGTTGTGTTTATTGGGATTTTTTGATGAATGATGGCTCATGGTCCAGTAAAGGTTGTCACCTTGTTGAAGTAATAGATGGACGATACGTTTGTGAATGTAACCACTTGACCAACTTTGCTGTTCTTATGGACCTGACCGGTACAGCTCATGGTAGCCAAGGGCTAAGACTCATCACACTCATTGGCTTATCTTTGTCTATTATTGGCCTTCTGCTCACGATATTGTCATTCATTCTATTCAAAAAGATACGCAAAGGTCGTCCACAAAGAACACTGTTGAATCTGGCCATTGCCTTGCTGTGTACATACATTGTGTTCCTG

Transcript

WZF166900.1

GTGTCTCCTCTCAGAGTCGCGTGTGGAAATGGAGCCCTGGCCATCCCATCAGAGGTGGCTGTGCCATCGTATGGCGAGGCTTATCGCCTGAGCTTAAGCTTGTTGACTGTGAAGACGTCCATCAGATTCTGTGCATCAAGCACGCATATGCACCTGAACTACAGCAGAATTACCCAGGTTGTCCAGCAGATTGGTATGGCCATGATGAGTTACATAAATGTGTCTACGTGAAGCACGACGAGGGTACTGGCTTATGTGATTTCATGGACAGTAGGAGGACGATAATCAACGAGAGGCGGCCAGAATACCACGTCGAAAAGGCACTTATATTCAATCTCCTACAGAAATTCAATTACACCATCCAGGTGCCATTGCCAAACACAACACCAATAACACCAGCATCTCCAACTCATGATACATCTTTGGCTTTGCGTGTCCGTCGAGGGGCAACAGCAATGACGAACTGCACCAGTTTCTATGTAAAAGCTAATTCTCAGATTATGCCAGTTCCGTGTCGTATCGGTCTGAATTTTGTGTGTGAAATGCCAATACAAAACTCAGATGTGGATTCTGGATCAGGTGTGGATCCTGGATCAGCACCCACAACCTGCCCTCATACATGGTTCACGGTTCCTGACCTCAGAAAATGTATCTACATCAGTCCATCTCAAGCGATGATAAACTTTAACCAAGCCATGCAGCAGTGTCAGAATTATTTGAGTGGACCAGATGGGCCAATCACAGCGACAGTCTTTCAGGCCATTTCTATTGTTGACATCAGGATCATTCAACAACGACTGCTAGAAGCTGGTAGATTGATCAACAGACAAGTATGGGTGAGCATGTTAACATCATCTGGTGTATCCAGCGTCTTTGAAACGACGGGGCCAACAACAGCAAGAACAACATCAGCAACAATGATGACAAAACCAACAATGACAAAGGCAACATCAACAATATCAACAAGACCAACAGACGCAACAAGAACAACAAATGCACCAAGAACAACAGCAATGACAGGAGCATCAACAACAAGATCAACAGCGACAACACGATCATTAGACAGGACATTGATTCCTTCATATCAATGTCATGCAGTTGGTGTCCATCGACTCCTGTCGATTCCTTGCAGAGCTTTGGCACTTGTTGTGTGTGAATCACCACTATATGCTCATATTTCTGACATTGCCTGCCTGTCAGGCTGGCTCCGGACTAGTGACATCAAGAAATGCTTCTATGTGACCAATATTACAGAGCACTTTGGCGCTGCTTTACAATACTGTAGCAGCCTCGGCTCTAGCTTGCTGACGGCCAGTTCTAAATCGAAGCTTGACATAATTCAGCAAGGAATAATGGAGCTTAAGTTATCATCGGAGAGCCTCGTCTGGGTGAACACGACTTCAGGGATTGCCTTTATGTTTATACCTGACCAAGGATTTCCAATTACTACTACTTCCACTACCACCACTACTACTCAGCCGCAGGTTAATTACAAATGTGTCCGTTTCATTAATAAAAGCATTTTTGTTCCTGTTCCATGTGACGGCCATGCGGTCAGCTTTTGTGAAAGAAGAAGATATGTTTCAGTGCCACAATTCTCTCTATGGGAATATCGTGTTAAAGTTCCTGAGAATCAAGTTTTGGCTGAAATGGTGAGAGTTAAAACTGCAGACTCTCCTTACACCATTGTGTACTCTGTTATAGCTGGTGATGATACACTGCCCAAATTCTCAATAAACAATCGGACCGGTGTAATTTCTGCCATTAAGCTTGACCGTGAACATCAAGACAGTTATACTCTAACTGTTTATGCTAGTTTTGTTGGTAGTCAATCGGGAGGGGCTACCTGCCAGGTCCATGTGAGTGTCCTCGATGTAAATGATAATGTTCCAGTATTTGCCCAGAGTGTATATGAAGCACGGATATTTGAAAATGCAGGAGAAGGTACACAAGTGTTAAGAGTCAAAGCCAGCGATGCTGATTTAGGTCGTTATGCATCTGTGAATTATTCCATTGGAATTGAAGCTAAACGAGTTTTCATGATCAATGCTGGAACTGGTGTCATCAGGATTATTCGTCCTCTCGATCGTGAGATTGAACCAGTATATAGGTTTATGGTAAAAGCCATTGATTACGACTCAAAATCCGCCGCTATTGCTAGCGTCGTAGTAACTGTTCTGGATGTTAACGACAACCAACCCACTTTCCGCAACACTATTAAATATATAAATCTCTCTGAGAGAACGCCTTCAAAGACAAAGATTTTAAGCATGGATGCAGTGGATAGAGATGATGACGGGAATATGACAGATATCGTGTACTCTATTGTTAGTGACTACCCACAGTTCAAGATTAATGCCAAAACTGGTATGATATCAACAGCAACAACAATATCATCGTTGAGACTCCAATCAACGCGCGGTCATTCACCAGTACTTAAGGTCATTGCAACGGATGGTTATCTTCTAACCAGTGCAACGGTGACAATACACGTGATTTTGGGAAGTTCTGCGCTAAAATTCATGACCAAGATGTCCATGTACCACGCTTATCTAGATGAGAATGTTGTAGTCGGCAACATGGCCAGTCAAGTTGCTGCTAAGTATAATAGAATAGACAATGAACGCCTGATTGAGTATGACATTGTAAATGGAAATGAAGACCGAATGTTTGGCATTGACAAGAAAACGGGAAAAATCATTGTCAACAAGACACTGGATTATGAGTACAAGAAACAGTTTCAGCTCACCGTGGAGGCAACTGATACTGGATTTTATGCGTATGCTATGGTGCGAATCCACGTCAAGGATGCCAATGACAATGCCCCAGAGTTTATCACTCCCTGTTACCCTGTCACAGTATCCTTGGGAACCAGACCACCAGCTGTTATCACAAAGATTACAGCCACTGACAAAGATTCTGGAATTAATGGGAAAATACAGTATCGTCTTTCTGGAAATGATAGTAGTCATTTCACTATTGATGAGCACGTCGGTATTGTGCAAGCCCTGATCACCCTAGAAACACCCCATGTATACAAGGTGTTGGTGTTTGCTAGCGATAATGGGAGTCCACAACTGTTCAGTGTTTGTTCGCTGGTCATTAGAGTTGCAGAAACAGACATACAGAGGAACAGTCGTGAAATGTTTGTAAATGCTTATGATCTGACCCGCACTGTGCAGAAGATGAATTGTGACGTCACAGACCGCAACGAGAATGTGCCCGCTTTTCTCACCAAAGACTCTCTTCCTATTAATAACAGTTACCATTCTTCAAATATCGGCATACTGCAAGGATGTTATAGCTGTGAAGTATGGGATCCATTTACAGTGAAACTCAGAACGCCTGCCCAATCCACATGCATATATTTGAACGATCACCTGACCTATCATGGTAAAATTGTGCTTACACTGTTTGCGAGTTCACGGGACATCAAACTATTCAACATGTTACGACAAGTCTCGGGAAGATTTCGTGATCTGCCTCGATATATGGATGCTCTCGTTTTGGGTCATGTGAACGAATTTGTAATAGACGGGAAAACGATTTCTCGAGAAAATGTAGACATTAGTATCACACACCTGTCTAATTTTGGTAATATAGGGATGTTGGTATCTTTTAACATATACGTTAATGTGAGAGGTGATGTTACTCCAGAACTGGATGCATACTTTTATCAGCAGCTGACAAATACCATCCACCATGAAAGTAAAACCCTTAGTAGCAGAGTTAGAGAGGAATATGAGCAAATGCGGCCAATTGTTCCTGTCCAGGGAAGTGTTCGCATCCATAGTACAGCACATTGCTTTGCACAGCAGATTGAGTCTCCTTATGGTGTATATCATGTTACTACGGCACCAATTGGCAGCTCATCAGATAGCATAGAGAAATGCCATCTTCAGAATGGTAATATTGTCCCACAGGCGAGAGCTTTCTGTAATGCATCCTTCACTACCGGAGCATCATGGGTGCTGGAATATAGCATTGCCTGCTCAGTGCTTTCTGTTGAGACATCTGATGCACTGGACTATTACTCAGAGGTTACCGTGACAACAGAAAATGCCCCAGATATTAGCGAGCAGGTTGCGAACCTCACATCAGATGTCCAAGATCTCAGTGCTACGGACGTGAATTCGGTCTCAAACACATTGAAGAATATTGCTGATGTAGACGGGATCGACATAGTGACGGCGGATGACTTTATCAATACAGTCAGTAACATAATGGATGTGGATGATACATTACTTAGTCAAGCCACCAACAATGCTCCAGCCAGTGTCATCGAAAGCCTCGACCGTTACACACAGAATGTCGATCTCGGTAACAAAACTGAATATAAACATGATACAAAGAATCTTGTCGTACGACTGTTTGATATCCACACATCATCATCAAATAGGTTAGCACTGGTGACTGGAATTCAGCTGCTTACTACGAACCAAGCATCAGATCATGGTGGCAAGGCTTGGTCTGAGAATATTAATCTGATCAAACAAGGCAGTGAAGTAGCAGGCTATGGGAACATTGAGGTCTCTCTTGAATTACCACTGGAACTATTTGCATCTTCCACAGGATCGAACCAGACAAGATTATCGTTCACAATCCAGAATGACATCAGTTTGTATGAAAGTCGCAAAGCCATTGGCTCTCCCGCGGAGGATAATTTCAAATTAAACAGTCGTGTCGTGTCTGCATCTCTCGGGAAAGAGAAGATTGAGAATCTTTCTGAGAATATTCGCATTATTTTCCACCCTATTCTGAACATTTCTAAAGAAGCAAAAGTTCGTTGTGTTTATTGGGATTTTTTGATGAATGATGGCTCATGGTCCAGTAAAGGTTGTCACCTTGTTGAAGTAATAGATGGACGATACGTTTGTGAATGTAACCACTTGACCAACTTTGCTGTTCTTATGGACCTGACCGGTACAGCTCATGGTAGCCAAGGGCTAAGACTCATCACACTCATTGGCTTATCTTTGTCTATTATTGGCCTTCTGCTCACGATATTGTCATTCATTCTATTCAAAAAGATACGCAAAGGTCGTCCACAAAGAACACTGTTGAATCTGGCCATTGCCTTGCTGTGTACATACATTGTGTTCCTG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00028	Cadherin	Cadherin domain	Domain	Interproscan
PF01825	GPS	GPCR proteolysis site, GPS, motif	Motif	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000203	Conserved_site	GPS motif	Interproscan
IPR002126	Domain	Cadherin-like	Interproscan
IPR015919	Homologous_superfamily	Cadherin-like superfamily	Interproscan
IPR016186	Homologous_superfamily	C-type lectin-like/link domain superfamily	Interproscan
IPR016187	Homologous_superfamily	C-type lectin fold	Interproscan
IPR020894	Conserved_site	Cadherin conserved site	Interproscan
IPR039808	Family	Cadherin	Interproscan
IPR046338	Homologous_superfamily	GAIN domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24027	CADHERIN-23	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000902	Biological Process	cell morphogenesis	Interproscan
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0005912	Cellular Component	adherens junction	Interproscan
GO:0007043	Biological Process	cell-cell junction assembly	Interproscan
GO:0007155	Biological Process	cell adhesion	Interproscan
GO:0007156	Biological Process	homophilic cell adhesion via plasma membrane adhesion molecules	Interproscan
GO:0007275	Biological Process	multicellular organism development	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0016339	Biological Process	calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules	Interproscan
GO:0016342	Cellular Component	catenin complex	Interproscan
GO:0034332	Biological Process	adherens junction organization	Interproscan
GO:0044331	Biological Process	cell-cell adhesion mediated by cadherin	Interproscan
GO:0045296	Molecular Function	cadherin binding	Interproscan
GO:0098609	Biological Process	cell-cell adhesion	Interproscan
GO:0098742	Biological Process	cell-cell adhesion via plasma-membrane adhesion molecules	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-