Gene detail

Detailed information of WZF157250 in Chaetoderma shenloong Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
WZF157250	UBIQUITIN CONJUGATING ENZYME 7 INTERACTING PROTEIN-RELATED	chr1	72785218	73036885	-

Gene Structure

More details in Jbrowse Sequence

CDS

WZF157250.4

ATGGGCAATATTCAACGAGGTCGTCAAGGTGGAAAAATTAAATTCATTACTCATAAATCTGGAGCAAAAATTGAAATTGATAAAAGTAATCCTAATGAAATGATTGAAGTTGTGATAAAAGGAGATCCACAACAGGTGGCGTTGGCCAAGGACCTGATTCAGCAGACAGTCGATGGAGTGAATGTGCTTTCAATCAATGGGGGAAACGATCAGCCAACAATATATCAAAGAGACAGTTGCAGGCCACCACATAATGAACAGTACCAAGGGAACTACATGCCACAAAATAACAAACAGTGCCAAGGCAATTATGGGCCACAACATACCAATCAGGGCCAAGAGAATTACGGGTCACAACATAACAATCAGGGCCAAGGGAATTACGGGTCACAACATAACAATCAGGGCCATGGGAATTACGGGTCACAACATAACAATCAGGGCCAAGGGGATTATATACCACAACATAACAATCAGTGCCAAGGCAATTACGGGCCACAACATACCAATCAGGGCCCAGGGAATTACGGGTCACAACATAACAATCAGGGCCAGGGGAATTACGGTCCACAATATATCAATCGGTACCAAGGGAATTACGGGCCACAATATAATCAACAATACCAAGGGCACAATGGCGGGCCACAACATAACAAACAATGCCAAGGGGATTATCGGCCACAACATAACAAAAAGTACCAAGGAGATTGCTGGCCACAACATAGCAAACAGTGCCAAGGAATAACAAGCCGGCATAACTATGTCCCAAAAACAGCAAGAAATATGACTATGGGAGAATCTGTCCCAATCCAACGCTTAATGAAAACCAAGACAAGACAAGATGGAAGAAACACGGCAGAAGAACCAGACAGCAATACTGAGAATGAAGAGTCCGATGTAAGCAGAGAAACTGTATTGGAAGTAATAGTACCGCACAAAGCTGTCGGCAGCGTGATTGGAAAGCAGGGAGTGCAGATTAAACAGATCTGTACAGAGACTGGTGCAAAGCTAAGGTTTAAAGATACTCTTCGTAATCCAGACCAAAATGATGATAAAGATATGAAAATGAGTATTTTGCTCATTCACGGAAGCGACAATTCGGTAGATCGTGCACTGGAGGTGATACGAAAGATTGTCCGCCCATTTATTATCATATTTAATCTTGCTGACCATGAAATGGTAATAAAGAGAGAATGTGTGGTGGAGCTGGATATACCAAAGAAAATGATTAGTACGGTTACTGGAAGGAAATGGATGAACATCAGACAGACAGAGCAGAAGACCGGTGCTAGAATGTACCTACCTGAGCGCCATGTGACTAGTAGAGGATTATTTATCAGGAGGATGGTCATCCGTGGTACATCTGAGGCAACTAGGCAGGCAGAGGAGATAATTAGAAAGTTAATGGCGGATGTCAGTACAGAACAAATGTTTATCTCTGTTCATACTTTGAAGACAATGTTTGGTGATCTGAAAAGTGACATACGAGCGATTAGCCGACTTTCTCATGACAATGCCAGAATTACTGTGTCATCGGAGGGTGATGATAAAGACCCAACGACGATGAAACTTATCACGATTACTGGTCTGGAAGAGGATGCAAAGACCTTGAAAGGGTTACTTACTGAGCTTGCGGATTCATTTGAAGCCGAGGAAAATGATGCTAGAATGGCGAAAGAGTTAGAAGGAACCGACAGCATTAATGACCCAGCACTTGCAGAATTGATACAGCAGGGGCCAGAGGTCATTGAACATAAGACTGAACTCTTCGAATGTGGCTGCTGCTTTGATGATGAGGTAGAGTTTGAAGAGATGGGTCAGTGCAATGATGGACATCTCTTCTGCAGAATGTGCATCGCACGTCATTGCGAGGAGATAATGGGCCAGGGACGCTCAACATTTCCTTGTCTTGGTGCAGATTGTGAGGAGCACTTCCCTCCATTGCAGTTGCAGATGGTGCTGCAGAGTCCATTGCGTGAGGGGATATTGAAGATTGTACAAGCAGAAGAACTGCATCAAGCAAATATTCCAGACTTGGTCACATGTCCACACTGCCCATATGCTGTCATCATGCCAGATGAGAGTGATACAGTGCTTCAATGTGAAAACCCAGACTGCCTTAAACAAACTTGCAGGCTGTGCAAGGAACCAAATCATCTACCCCTTCGTTGTAACCAAGTTGAAAAACCTGGGGAGACCAACATGCGGACCTATGTTGAGAACAAGATGACCGACGCTCTGGTCCGCACATGTCCCGAATGTGGTAAAAGGTTTTATAAAGTGGACGGTTGTAACCACATGACCTGCCCATGTGGTGCATCAATGTGCTATGTGTGCCGCCAACCCATGGGCGCAACTGGACATGCTCAATGCCAGCAGGACACAGATGTAGCCACCCTTCATGAGCGTGAAGTTCGACAAGCAGGAGAAAATGCCAAGCAGTCATATGTCAAGGATCATCCTGAAGCTTCGGGAATTGATCTGATTTTCGATCCTTTAGCGCCAAACACTGCAGCACGCAGTACCAGCGTGAACCGACCAGGCGTGTCTCTTTTCAATCTGTTTTAA

Transcript

WZF157250.4

GTTCCTATTTCCCGGAAAAACCTGGGGATTTCCCCCGCTTCGAAGGTTTCGATTTCCTGGTTGGTTCCCGCTAAGTTTGGTATTTCGAAATGTTATTTGTTGGTGCTTATAATATTATATAAATGTTGCTGAGATAAATCAAGGAACTGACTTTATGCACTCGTGGTCAGACATCAAATCAAAGTTACTGATTGTAAAAGAGAGAACGACCCGTTAACTAGAGTTAATAATAAGCTACCTTTTTCGCGGAAATACTGCGCTCGCCAGCGAAACACCGTAACGTAACGCAATCATGAGATTATCACATGACAGTTGTCTGTCATCAGCTTACGTAGTTGACCTGATTGTCTGAAATATGGCAGAAAACATCTCAAACAACAATGATAGTCTGATCTGCCCAATATGTGGTTCAACGTTCATACATCCCAAATCTTTACCGGTGTGCGAGCACAGTTTCTGCGAGTCATGTATTCGGAAATACGCTTATATGAATGGATACAGTCAGAAGGGTGAACTGCCCTGCCCATCGTGCGGAGAGGTGACACCCATCCCCGAGAACGGCGTATCTGGATTTGACGATAATAAAGGGCTGATAAGTCGATTACAAGTTATCGTCTCAAAGATATTTAAAGCTCCTCAGCCACAAGTAAGAGAACATCGGATTTCTCAGTCTGATGGCGGAAATAAGGGCTTTGTGGACAAATCACAATCAGATGGCAGAAATAAGGGCTTTGTGGACAAATCACAATCAGATGGCAGAAATAAGGGCTTTGTGGACAAATCACAATCAGGTGGCAGAAATAAGGACTTCGTGGACAAGTCCAGCAGGTGCAGCACGACGGTAACCGAAATGGAGCTTAATAAAGCGGATGTAGATATACTCAGTGCCAGAGAATGGGCAATATTCAACGAGGTCGTCAAGGTGGAAAAATTAAATTCATTACTCATAAATCTGGAGCAAAAATTGAAATTGATAAAAGTAATCCTAATGAAATGATTGAAGTTGTGATAAAAGGAGATCCACAACAGGTGGCGTTGGCCAAGGACCTGATTCAGCAGACAGTCGATGGAGTGAATGTGCTTTCAATCAATGGGGGAAACGATCAGCCAACAATATATCAAAGAGACAGTTGCAGGCCACCACATAATGAACAGTACCAAGGGAACTACATGCCACAAAATAACAAACAGTGCCAAGGCAATTATGGGCCACAACATACCAATCAGGGCCAAGAGAATTACGGGTCACAACATAACAATCAGGGCCAAGGGAATTACGGGTCACAACATAACAATCAGGGCCATGGGAATTACGGGTCACAACATAACAATCAGGGCCAAGGGGATTATATACCACAACATAACAATCAGTGCCAAGGCAATTACGGGCCACAACATACCAATCAGGGCCCAGGGAATTACGGGTCACAACATAACAATCAGGGCCAGGGGAATTACGGTCCACAATATATCAATCGGTACCAAGGGAATTACGGGCCACAATATAATCAACAATACCAAGGGCACAATGGCGGGCCACAACATAACAAACAATGCCAAGGGGATTATCGGCCACAACATAACAAAAAGTACCAAGGAGATTGCTGGCCACAACATAGCAAACAGTGCCAAGGAATAACAAGCCGGCATAACTATGTCCCAAAAACAGCAAGAAATATGACTATGGGAGAATCTGTCCCAATCCAACGCTTAATGAAAACCAAGACAAGACAAGATGGAAGAAACACGGCAGAAGAACCAGACAGCAATACTGAGAATGAAGAGTCCGATGTAAGCAGAGAAACTGTATTGGAAGTAATAGTACCGCACAAAGCTGTCGGCAGCGTGATTGGAAAGCAGGGAGTGCAGATTAAACAGATCTGTACAGAGACTGGTGCAAAGCTAAGGTTTAAAGATACTCTTCGTAATCCAGACCAAAATGATGATAAAGATATGAAAATGAGTATTTTGCTCATTCACGGAAGCGACAATTCGGTAGATCGTGCACTGGAGGTGATACGAAAGATTGTCCGCCCATTTATTATCATATTTAATCTTGCTGACCATGAAATGGTAATAAAGAGAGAATGTGTGGTGGAGCTGGATATACCAAAGAAAATGATTAGTACGGTTACTGGAAGGAAATGGATGAACATCAGACAGACAGAGCAGAAGACCGGTGCTAGAATGTACCTACCTGAGCGCCATGTGACTAGTAGAGGATTATTTATCAGGAGGATGGTCATCCGTGGTACATCTGAGGCAACTAGGCAGGCAGAGGAGATAATTAGAAAGTTAATGGCGGATGTCAGTACAGAACAAATGTTTATCTCTGTTCATACTTTGAAGACAATGTTTGGTGATCTGAAAAGTGACATACGAGCGATTAGCCGACTTTCTCATGACAATGCCAGAATTACTGTGTCATCGGAGGGTGATGATAAAGACCCAACGACGATGAAACTTATCACGATTACTGGTCTGGAAGAGGATGCAAAGACCTTGAAAGGGTTACTTACTGAGCTTGCGGATTCATTTGAAGCCGAGGAAAATGATGCTAGAATGGCGAAAGAGTTAGAAGGAACCGACAGCATTAATGACCCAGCACTTGCAGAATTGATACAGCAGGGGCCAGAGGTCATTGAACATAAGACTGAACTCTTCGAATGTGGCTGCTGCTTTGATGATGAGGTAGAGTTTGAAGAGATGGGTCAGTGCAATGATGGACATCTCTTCTGCAGAATGTGCATCGCACGTCATTGCGAGGAGATAATGGGCCAGGGACGCTCAACATTTCCTTGTCTTGGTGCAGATTGTGAGGAGCACTTCCCTCCATTGCAGTTGCAGATGGTGCTGCAGAGTCCATTGCGTGAGGGGATATTGAAGATTGTACAAGCAGAAGAACTGCATCAAGCAAATATTCCAGACTTGGTCACATGTCCACACTGCCCATATGCTGTCATCATGCCAGATGAGAGTGATACAGTGCTTCAATGTGAAAACCCAGACTGCCTTAAACAAACTTGCAGGCTGTGCAAGGAACCAAATCATCTACCCCTTCGTTGTAACCAAGTTGAAAAACCTGGGGAGACCAACATGCGGACCTATGTTGAGAACAAGATGACCGACGCTCTGGTCCGCACATGTCCCGAATGTGGTAAAAGGTTTTATAAAGTGGACGGTTGTAACCACATGACCTGCCCATGTGGTGCATCAATGTGCTATGTGTGCCGCCAACCCATGGGCGCAACTGGACATGCTCAATGCCAGCAGGACACAGATGTAGCCACCCTTCATGAGCGTGAAGTTCGACAAGCAGGAGAAAATGCCAAGCAGTCATATGTCAAGGATCATCCTGAAGCTTCGGGAATTGATCTGATTTTCGATCCTTTAGCGCCAAACACTGCAGCACGCAGTACCAGCGTGAACCGACCAGGCGTGTCTCTTTTCAATCTGTTTTAAGATATCCGCACCTCTGATGATTGATGAAGAATACAACTTCAGCTATAGCTAATCAATATTGTCCGAAGTTAATCACACACTCTGTCGATTCCTTCAATTTACAGAAATTGACATCCATTATATTTTGGAGATCAAGCAATTCCAAAAAAGTTATGTAGCAACAACAATAAAATCTGTCCTTAGTGATACCTAACCCATAGTCCTGCCGCTAAGTGCTGTTGCGACTAAGTAGCCACTTATCACAGCTAAGTACCTGCTAAGTAGGAGGTGGTTACAATTTTATCGTGCAAAATTAGTTACCTGCTAAGTAGCGCCAACTCAAAATCTAATTGGTTAAGAATGAGCCAATCAGTGCCTGCCGTTTAGTAACTGCTAAGTTTGCCGCTAACCAATAGCTCAGTTTACCGTTAACTAGCCACTCAGTTTGTGACTCAAGTAATATTACATCACTATGTCATATGTAGGCTGATGTCACAAACATAATGGACCTTTCCGGTTTTAGCTATGTCCCGCCCATCTCTAGCTAAGCTCCACCCACACATCGCTTGTGTTGGGATCAATCGATCTCTGAACACCCTGACTATCAATTTCCACAAAATTACACAGGTAAGCTGTTGAATATTTTGAAACTAATTTGACTGGGTGCTGTTGCTGCCTAAGGCAGCAACAGCACCCAGTCAAATTAGTTTCAAAATATTCAACAGCATGTTTATTAAATAGCAAAGAATTACAAAGACATACAATTTATACAACGTGTCAGACTTTTTGAGATTTGATGTAATGATTGTGACATCATCATACGAGTTCAGATGATGGATGGATACTCTGGAAAGGTGAATTGGGAGAAAATACTCCATCATGAACATGGAATAACCTGTCGAGTGTATGAATTGTATGTCTGATGGAGTTACTATTTAATAAATATTCCTTTGAATATTTTGACGTTAATGTGACTCAGGGAACTGTTGCTACCATATGCAGTAACGGAACCCAGTCAAATTAGGTTCAAAATATTCAACATCTTGTCTATAGTTACCTTGAAATTGGTATTCTGGGAAGTCAGGGTTTAAAGTATATAATTTGATGCGAACACGCGCAAAGCATGAGTGGAGCTTAACTAGAAATGGGCAGGGCATAACTGGAAATGGATCCGTCTTCGTGATGGCAGAACCGGACATGATCATTTTGGTCTATCACAAAATTATGTGGCTGTTTCAGTTATATAAATTTTTGTCGGTTGTATGAATCCACTTTATCCATCCATCATATGATGCCAACTATGTGACATATGGAATGAAATCATAATTAATGACATCATTATGACGTCGATAAGTACGTCACAAACACATAATTGAAGACAGACTATGCGTTGTACGAATTGTATGTTTTTACTATTTAATAAATATCCTGCACCCAGTCAAATTAGTTACAAGATATTCAACAACTTAGTTGTATAGTTTTCAGGAAACTGATAGTCAGGGCATTCAGAGATTGATGGATCCCAACACGGCGTAATGTGGGTGAAGCTTAGCTAGAGGTGGGCAGGGCATAGCTAAAACTGGACATGTCCATTAAACTGCTACTGTAATACTATTGTAATGTTTAACTGTCTGACTGCTGCAGGCCACCAAACAATAATTTCAATGGACAATTAGACTGGCTGTGCTGAATATTTTGAAAACAGTTTGACTGAAAGCTGTTGGTGGCCGAGGTCAAAATATTCAGTATAGTCAGAGATAAACCCCGCGCAAAAAGTAGTCTGCTGATATTCAAAAGTCCAGACAGTTAACTCGGTGGTTCACATGCTTTCAGCTGCAGAACAGTCACATCATCATCATCATATCATCATCATCATCACCACCAGCAGTAGCAACATCATCATCATCCGCAGCATCAGCAGCTGCTGCTGAATAGCTTTATATTCTTCCCTTCTACAAATAGTGTATACAGAAAGATTTTAAGATCACAATTTTAACCATTTAACCCTCAAATTTGGTCAGGAAAATTTAAATTTTCTCATAGAAAATGTCTATTTGCAGAGCGAGAGAAAACTATATTTGAAAACTTAGCACTTGAATGACTGGCTCGGTTATCGAGCCAGTCATTCCAGTGGTAAACTTTCAAATAGAGTTTTCTCTTGGTCTGCAAATGGGCATTTCTCAAGACCACTGCAGAAGCCATTTTTGGCTGATATGAGTGTTAAAGGGTTAAGCACATATTTGCTACACAACTTATATTATTAGCTCACATTTGCCAGAATGGCCAAGTGAGATTCATCGTCCTATTGCACGACCCTCGCCCTTCCACTACGTTCCCATATTGAGTACCGTGCTTGCATGCCTTTGATGTTTGCGCTAAGTTCACGAACTGGGATCAGTCAACTTGCGCCAATGAGATTGCTCGGTAAGAAATCAGGAAGTAGACAAATTTACACATGTGCGTAAACCAAACTAGCGGTTTTTGTTACCGAAAACTGATCTACACATTTTCTGTTCCTCAGATAACTTTTTTAGAGCAAAACTATTGCAAACTTTTGCAAATGTCTCTTTCCAGATCAACAGCGTCGTGATCGCTGTTGCTTTTGTGATTGTAAATTAGGTCACCAGACGAACTCTCGCCTATCGCATGAAGTAGGCAGAAATCTGAATGGCTACCCCAAACCCACTAGCGTAATGTTACTTCACATAGCATGAAATCACAGGTCTGCAAGTACAGCCTCGAACAGAGTAACTATGTGAGTGGGCGTATGTTAGTACAATGAGAGAGCTTATGCCATGATAACACTGTCAGCTGTCTATCTATGCTTATCGATTTTTAACCCAATTTGGCTGGTTTCGAGGATCATATGGCGGTAGGCTCACAAACATCTAATCTGCTGGTAAATTTTTTGGTGTCGATTTTCTGGACTCATTTAAAATTTCTAGTCTAACTTATGGACAGATTTCTGTGAAACTTGAGTGGAATGATCCTATGATGAGAGGATTCAACGAGAATTTGATTGGTCAATTTTGTAGGTGGCCAAATTGGATTTCCTGAAAATTATCGGGACATTTTTTAACTGTCATCTTGTATTCTTTGCATGCAGCAGAGTGCTGCTTTCCAGATGATGTCTTTAATACTCCATAGCTTGATTGAACTTGCGTCCTGGGAAGACACCTGTCGAGATTCATGAATCCATTTCCTCACTCAAGACGTGTATGCTGACGTCATAATCATGACGTCATGAATGATTCGATTAAGCCCGACTTTAACACTTAATAGTCGGACACATTGTACAAATTTTATGGTTTTGCTATTTAAGAAACATGCGGTTGAATATTTTAAAAACTAATTTGACTGGATGCTGGTAGCAACATGGCCCAGTGAAAGTAGTTTCAAAATATTCAACAGTTTACCTGAGTGTATAGTTTTCTGGAAATTGATAGTCAGGAAGTTCAGAGATCTATCGATCCCAACACGAGCGAGGTAAGGGTGGAGCTTAGATAGAGATGGGCGGGGCATACCTAAAACTGGAAAGGTCCATTAACGATGATCCAAAATCCAAGATGGCCACCATTCATTCTAATATATTTCAGTGTCTTATTTCTAAATTGAACACTTTAGCCCTTATATCAGCCAAAAACGGCTTCTGCAGTGTTCTTGCGAAGTGTCCATTTGCAGACCAAGAGTAGACAATTTTTGAAAATTTACAACTGGAATGACTGGCTCGGATAACCGAGCCAATCATTCCAGTGGTAAATTTTCAAAAATTTTATTTTCTTGGTCTGCAAATGGACATTTTCTATAAGAAAATTGAAATTTTCTTGAGCAAAATTTGAGTTAAAGGGTTAAAGGATCATGTATGTTTAGACGCAAATCTTTCAAATGCTAATGCTTCAGGTGCGCATCAAACGCCATTCGTATTTTTGTTTTAAAAATCTTTAGCAGATTGAGTTAAAGCTTTTCTTTGTTTTTGTTTTCAATTTGCAACTGCAGGTATAAGTCGGTTTGTTTGTATCTGCCAGTATTTTAAATTATTGGCATTTCCAACAAAGCTGTCTTAAAATTGCAAATAGCATGTCATACTCTTTTTACGATATGTAGATTTAATATTCCTAATAAATATTTCTCTTAATATATTACGGATAAATTAAGATATGTATTTGTATATATAATAAACATGACTGTGTATCTAAATGTAATGAAATGAAATAAATCTTAACATATGACGATTTCATTACATATATATTAATAAAAAAAATTTAAGTTGTGAAATTGAATTGTAGACACAAGTCACTAATTTCACAACTAAAAAATTATATTAATTTTTATGAAATAAAACCACCATCCATTAAGATTTATTTCGCTACATTACATTTGGATACACAATTTAAATGTCTAAAAGTATACAATTTTGTTTTCAAGCAATTTGGTGCGAATATGTACCGTTAAAGAAAACCTCTATAAATTACACACAAGCGTGCACGCACGCACTTACTGCATGGGATTATGTTTTGCTCTTCTTATATTGGCTGTTTGTTGACTATTTTAAATAAAGCTATATATTTTTGATGTTATTTATAC

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	E3\|E3 activity RING\|RING
Ubiquitin Family	E3\|E3 activity\|RBR

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00013	KH_1	KH domain	Domain	Interproscan
PF01485	IBR	IBR domain, a half RING-finger domain	Domain	Interproscan
PF13445	zf-RING_UBOX	RING-type zinc-finger	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001841	Domain	Zinc finger, RING-type	Interproscan
IPR002867	Domain	IBR domain	Interproscan
IPR004087	Domain	K Homology domain	Interproscan
IPR004088	Domain	K Homology domain, type 1	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR017907	Conserved_site	Zinc finger, RING-type, conserved site	Interproscan
IPR027370	Domain	Zinc finger, RING-type, eukaryotic	Interproscan
IPR036612	Homologous_superfamily	K Homology domain, type 1 superfamily	Interproscan
IPR044066	Domain	TRIAD supradomain	Interproscan
IPR047544	Domain	E3 ubiquitin-protein ligase RNF216, RING finger, HC subclass	Interproscan
IPR047545	Domain	E3 ubiquitin-protein ligase RNF216, BRcat domain	Interproscan
IPR047546	Domain	E3 ubiquitin-protein ligase RNF216, Rcat domain	Interproscan
IPR051628	Family	Linear Ubiquitination-Associated E3 Ligases	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22770	UBIQUITIN CONJUGATING ENZYME 7 INTERACTING PROTEIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000151	Cellular Component	ubiquitin ligase complex	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0004842	Molecular Function	ubiquitin-protein transferase activity	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0043130	Molecular Function	ubiquitin binding	Interproscan
GO:0043161	Biological Process	proteasome-mediated ubiquitin-dependent protein catabolic process	Interproscan
GO:0071797	Cellular Component	LUBAC complex	Interproscan
GO:0097039	Biological Process	protein linear polyubiquitination	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-