Gene detail

Detailed information of WZF155500 in Chaetoderma shenloong Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
WZF155500	DNA POLYMERASE CATALYTIC SUBUNIT	chr12	94404690	94437964	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

WZF155500.1

CCGGTATTCGATATAATATCAGTATATCGTGAAGCCCTACCGTTAGCCTCCTGTCGCAGGCTAAAGCTTTGTTACATAATTTTAGTCAAATCAAATGAATGTTACATTCTTTTCATTGAATTCTCACTGAACAAAGAAATTATGTCCAGCTAATCATTTCAATTTTATCTTATCATCTTCATTTGTAGGATGAAAAAGCGTGACCCGGGTAGCGCCCCTCAGATGGGTGACCGTGTCCCATACGTGATAGTTGCTGCAGCCAAGGGAACGGCGGCATACATGAAATCAGAGGATCCAATCTTTGTTCTGGAGAACAATATTCCAATTGACACGCAGTATTACCTTGAGAATCAGCTTTCAAAACCTTTGCTCAGGATATTTGAACCAATACTTGGAGAGAGAAAGGCAGAGTCAATCTTATTGAAGGGTGAACACACAAGAACTAAAACAGTGGTGACATCTAAAGTGGGAGGACTGGCAGCTTTTACAAAGAAACGTGCTACCTGTATTGGCTGTAAAGCATTACTCGATTCAGAATCTACTGGTGCCGTATGTAAGTACTGCAAGCCACGGGAATCTGAGTTATACCAAAAAGAAATTATGCAATTGAGTATGATGGAGGAGAAATTCTCGCGGTTATGGACGCAGTGTCAGCGATGTCAGGGTAGCTTGCATGAGGATGTTCTGTGTACGAGCCGAGACTGTCCAATATTTTACATGCGCAAGAAGGTGCAGAAAGACCTCTCCAGTCAGGATAAGCTCATTCAGAGATTTGGACCAGTCACTTGGTGACACTATAATTAGCTGATTAATAATATGTCATCCTATCTATGTATTTGTTTTGTAACATTTATATAGGCCTCATACTGACCACTGATACAGGAAATAGTGGCTAGTTCTGACTGGGTTGGTTGCGATCCTTGACAGTGCTTGAATGTATAAATTATTTTTTACGTCTGAAATGTACTGAAGTGCTTGAATTTGATGAATGATCAAATTTCACATGCGCTTACAATCGTCAAACAGGATTATGCGCAGCATTGAGCCCATTCACAGTATCTATTGATTTTGTGTAATTTTTCCCACTCAGTGTTATGATATTGCGATAATTCACGTTGCCGGAGTATGCATCTATCATCTGACATCATAAACAGCTAAGGGCCGTGTAGGATGACATCATAATTATTACGTCATAAATGATTCTATATGGCCCATCTTTAACTCTTAATAGTCTACCTCGTTGCACGAATTGTATGTATCTAATATTTTGAAACTAATTTGACTGGACGCTGTTGCTGCTATAGGCAGCAACAGCGCCCAGTCAAATTACTTCCAAAATATTCAATAGCTTACCTGTATAGTTTTCTGGAAATTGATAGTCAGGGAGTTTAGAGATCGAGCGAGGTGTGAGTGAAGCTTAGCCAGAGATAGGCGGGGCATGGCTAAAAATGGAAAGGTCCATTCTGTGCGCCATAAAGAAGGTTTGTTATTGATGATGCATACAAATTGTTTAAGAATCCATAAAAACGGCTACGGTAATGAAAGGTTCTTAAATTATCAGCATCCTTAGCTGTCCGATTTCTGCAAGCCACCTGGCAATAATTTCAATGATGCTGATCAATGCTCAATAATTACGTAACTCGTAAGGGACATAGCTCTTCAGGGATAGAACAGTTAAAGATGCTTATATAGATTGTTATTTCCCTTGAACAACTATGCGCACGTTAGCTGTCCCACCACTGCAAGACACCGGATAATAATTTCAATGAGCAACAAACTTGAAAGACTAAAAATTCATGTGTCAAGCCGGTCAGAACCAGCCTCTGCAGTTGTATTGAGGAATGTCCATTTGCAGGCCAAGAGAAGACTATTTTTGAAAATTTATCTCTGGAATGCCTGGCTCGATAAACTGAGTCAGTCATTCCAGTGGTGAATTTTCAAAAATAGTCTTCTCTTGGCCTGTAAATGGACACTCAATAAGTAAATATTTTGATTTTCTGCACCAAATTTGACCAGTAAAGCATTAATGGTTAAAGCTTTATCATACTTTGTCTACTAAAGGTATTTTACTGTGGCAATGGAGGGATCCTGATCTCACTCAAATATCTAACCTCATGATCAAATCCATCACATGTTAGCCGAGTTCAACATTCGGGTGAATATTTTGAAACTAATTCGACTGAATTCTGGTGTAATAGACAGTAACAGCTCTCGTTCGAATTAGTTTTTAAATATTCACCACCTTAAATGGATAGTTATATTGAAATTAAAATTTCTGGGAATTCAGGTTTCAAATCGATGTCAGCACACGTAAAGTGGCCAGAGGTTAGCTAGAAATAGGCGTGGCGTAGCTAGAAATCAAGCTAGAAATAGGCATGGCGTAGCTAGAAATCAATCCCTCTGTTGATGTATTACTAGTATGTTACCCACTGTTTAGTGTCCACTTCTTAACCCTTTACAGGCCAAGTGATAATTTTTTGAAAATTTACCCCTGGAATGCCTGGCTCGATAACCGAGCCAGGCATTGCAGTGTTGAATTTTCAAAAAATAATCTCTTGGCCTGCAAATAGACATTCACTAGGCAAATATTTAGATTTTCTTGACACAATTTGCCCATTAAATGGTTAAATGTGGGATGATTACTACTGATAAATTTGAAAACAATTTGACTTGCAGTCATATGGAGGGACCCATTTCTAACTATGCCCTGCCCATTTCTAGCTAACCTCTGCCTACTTTTTAAGCACGTTAGAATTGATTTGAAACTTTGAAACCTGAATTCCAAGAACTTAAATTTCAAGGTAGCTCTACAGATAAGCTATTAAATATTTTGAAACTAATTTGACTGGGGGATGTTACTGCCAGTCAGGTTAATTTCAAAATATTAAGAGAATGTTTATTAAAATGTAAATTCTCCAAAGACTTAGAATTTACAAGTATACTTAATAGACAGATTTTTTATTATCGTGATTGAGGTTGTGACGTCAGTTAGCATCTGACATATTTGATTATGACATCAGATACTTAAGTGACAGATCAGTTCCTTCCATTGACCTCAATATATACAGCAGCTTGTCTATTTATCCTGTGACTGACTTTGGGATAAAAGGTTTAAGGATTAAACTTCCTGTTTAAGTAATGCATGTTAAAATCACCTGACAAATTTAACACTTAATCCTGAAATCGGGCTATTTTAATTTAAAGGCAACGATAATTGTAAGCTGTTAAATATTTTGAAACTAATATGATTGGAAATTGTTGCTGTATCGGGCAACAAATGCTTTCTATAAACAGTCTCTAAATTAGTAAATTTTAAGTATGAAAAAAATAGTTTTTGGAAATAAATATATGGTTTGTAGTAAATGATCAA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00136	DNA_pol_B	DNA polymerase family B	Family	Interproscan
PF14260	zf-C4pol	C4-type zinc-finger of DNA polymerase delta	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006134	Domain	DNA-directed DNA polymerase, family B, multifunctional domain	Interproscan
IPR025687	Domain	C4-type zinc-finger of DNA polymerase delta	Interproscan
IPR042087	Homologous_superfamily	DNA polymerase family B, thumb domain	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR050240	Family	DNA polymerase type-B	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10322	DNA POLYMERASE CATALYTIC SUBUNIT	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000166	Molecular Function	nucleotide binding	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0003887	Molecular Function	DNA-directed DNA polymerase activity	Interproscan
GO:0006261	Biological Process	DNA-templated DNA replication	Interproscan
GO:0006287	Biological Process	base-excision repair, gap-filling	Interproscan
GO:0006297	Biological Process	nucleotide-excision repair, DNA gap filling	Interproscan
GO:0008296	Molecular Function	3'-5'-DNA exonuclease activity	Interproscan
GO:0043625	Cellular Component	delta DNA polymerase complex	Interproscan
GO:0045004	Biological Process	DNA replication proofreading	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-