Gene detail

Detailed information of WZF147510 in Chaetoderma shenloong Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
WZF147510	SERYL-TRNA SYNTHETASE	chr4	11985412	12107524	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

WZF147510.2

GCGGTATCTACCTAAGAAGAAGAAGAAGAAGAAGAAAATCACCGACAACCTTTCTCAATATCAGATATTGTACGCAGTGCAGATATTTCATGAAGTATGAAACCTCACTGAGAAAGTCTACTTATTTTACAGTGAAGTTGGTTGTATATTATCAGCACCAGTGATGTCATCGAGTCAGCCTCTCATCAAACAGTTACAGATGTGTGCAAGATGGAGCCCAGGCAGGATGATGCACTTACTCAGACAACATAGGATGAGAAATCATGCGTGTTACCATTCTAATAGTGTAGATTGTGTTGGTTATGCCAGCTGCTTGCATATACGTGCAGACAGGCAAGGTCAGTGTACTGGAACGGTTCATAGAATTCACTTCAAATGGCGAAGGTTGTTAGATACTATGCGCTGTACAAATACTTGTAACCGCAGACCGTATTCAGGTACAAACTTACAGACAATTTTCCCATTTTGTGGTAATATGAAAAGACATTTGTGCACAATAACTATCTGCTTCCAATGGCAGCCATGTTCTGTTGCATTGGATAAGAGAGCAGCATTTCACAGTAATGCCTCTAGCGCTATGTCTGTAGATCGGCCATCAGCATTGTTCATCAGTGATGCTGTAGCACAACATACTGGATCCATTCCTGTCACGCTTGATCTGGAGGATGTGTTAGTTAACAGATTTTCTGATTTGGGAACCAGCGTGAAGCTACGAGGATGGAATACAAAGTTAGACATGCCACTGCATGAGTTGGTTGATGATTACAAGACGATGAAAACAATGCAAGCTGAGCGAACTCTTCTGCAGAAAAAGAGAACAGAAATTGTTGATGACATCCAGGCCATCGATGAACAGAATTATGATGATCAAATTGCGACGGCTATGAAAGAGAAATTGATCATAGAGGGTCGATCATTGAGAGAGCAGCATAAACAGGTCACACATGATCTCTGGCCTATAGAGAGACGTGTCATGCTGTCCGTATTGAGTCTTCCTAATTTCTTATTGCCCAATGTGCCCGAACATACTCCTGTTGTACTTGCAGAAAGAGCTGCTTCTGATGAGCATGTACAATGCAGTCATACAGATAGTGCCTATAAAGATATCATTTACTTCAGCCCAGTAGGCATGAGGGCTTATTATTTGTGTGGTGAGGCAGCCATTTTGGAACAAGAGCTGACTGCGCATGTATGTGACTGTTTACAGAAATCTGGCTTAATCCGTATTTCAGGGTCTGATTACTTCAGATCTGTTATCACCGAAGGCTGTGGCAATGATTTTACTGATCCACATGAGGTGTTCACTTTGGCATCAGCTGAGCCTAAAGCGCATGAACAGATTGAGAATGCTTATCACTTATCTGGAGCCGGATTAGAGAGCTTTGCAGCATACCTAGCCTGGTCCAAGATTAAGACTGAATCTCTACCGTTGATGCTCTTCACGACTGGCAGGTGTTACTCAGCTACACAGTTACCTATAGATGATGGTCTGTTCTCAGCCATGCAGTCTTCAAACGTGGAAGTATTTGGTGCTGCCAGTTCTTTAGAACAGAGTCTCAGTTTAGCACAAGACATTGAAGACCTTTTCTGGGAGATACACACAAGTCTTGAGCTGCCTATTAGACTTGTCGATATTCCCAGTCATAACCTTCACAGAAGAGAGATGCGACGTGTTGAAGTCCAGGCCAAAACAGCCACGCCACAGCAGTTTGTAACCGTAGCCACCGTGTCTATAATTGGTGATTACGTGAGCCAGCGTCTTGCCATGAAACACTCGGCATATGTTAAACGCTCACCAGATCTGAGCAATCTATACATTGTTCATGGTTGTGCTGCTAACATAACAAGACTGGTGGCATGCTGTGTTGAGAATGGAATGTATAACCAGGAGACCGGTCGCTTTGTCCTTCCATCCTCCATACCAAGATCCCTGAGCAACATTGAGAGCACCTCCTGATACAGTACATTGTCAGAAACTAAACATTTAATAAATGTATACATAAATTCTTTATGTGCTAAATTAAGATTTGTACATTACAAATAAATATGCTATGATGTTATTTTGTAGTTGACTTTGTAAACC

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
--	--	--	--	--

InterPro

InterPro term	Type	Description	Source
IPR002317	Family	Serine-tRNA ligase, type1	Interproscan
IPR010978	Homologous_superfamily	Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm	Interproscan
IPR042103	Homologous_superfamily	Serine-tRNA synthetase, type1, N-terminal domain superfamily	Interproscan
IPR045864	Homologous_superfamily	Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11778	SERYL-TRNA SYNTHETASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000049	Molecular Function	tRNA binding	Interproscan
GO:0000166	Molecular Function	nucleotide binding	Interproscan
GO:0004828	Molecular Function	serine-tRNA ligase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0006434	Biological Process	seryl-tRNA aminoacylation	Interproscan
GO:0070158	Biological Process	mitochondrial seryl-tRNA aminoacylation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-