| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| WZF063290 | LYSINE-SPECIFIC DEMETHYLASE | chr13 | 23773496 | 23895198 | + |
| CDS | |||||
| WZF063290.1 | |||||
| Transcript |
| WZF063290.1 |
| Protein |
| WZF063290 |
| Gene family | Subfamily |
|---|---|
| Transcription Factors Family | ARID |
| Ubiquitin Family | E3|E3 activity RING|PHD |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00628 | PHD | PHD-finger | Domain | Interproscan |
| PF01388 | ARID | ARID/BRIGHT DNA binding domain | Domain | Interproscan |
| PF02373 | JmjC | JmjC domain, hydroxylase | Domain | Interproscan |
| PF02375 | JmjN | jmjN domain | Family | Interproscan |
| PF02928 | zf-C5HC2 | C5HC2 zinc finger | Domain | Interproscan |
| PF08429 | PLU-1 | PLU-1-like protein | Family | Interproscan |
| PF21323 | KDM5_C-hel | Lysine-specific demethylase 5, C-terminal helical domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001606 | Domain | ARID DNA-binding domain | Interproscan |
| IPR001965 | Domain | Zinc finger, PHD-type | Interproscan |
| IPR003347 | Domain | JmjC domain | Interproscan |
| IPR003349 | Domain | JmjN domain | Interproscan |
| IPR004198 | Domain | Zinc finger, C5HC2-type | Interproscan |
| IPR011011 | Homologous_superfamily | Zinc finger, FYVE/PHD-type | Interproscan |
| IPR013083 | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR013637 | Domain | Lysine-specific demethylase-like domain | Interproscan |
| IPR019786 | Conserved_site | Zinc finger, PHD-type, conserved site | Interproscan |
| IPR019787 | Domain | Zinc finger, PHD-finger | Interproscan |
| IPR036431 | Homologous_superfamily | ARID DNA-binding domain superfamily | Interproscan |
| IPR047970 | Domain | Lysine-specific demethylase 5A, second PHD finger | Interproscan |
| IPR048615 | Domain | Lysine-specific demethylase 5, C-terminal helical domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10694 | LYSINE-SPECIFIC DEMETHYLASE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000785 | Cellular Component | chromatin | Interproscan |
| GO:0003677 | Molecular Function | DNA binding | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0006338 | Biological Process | chromatin remodeling | Interproscan |
| GO:0006355 | Biological Process | regulation of DNA-templated transcription | Interproscan |
| GO:0010468 | Biological Process | regulation of gene expression | Interproscan |
| GO:0032452 | Molecular Function | histone demethylase activity | Interproscan |
| GO:0034647 | Molecular Function | histone H3K4me/H3K4me2/H3K4me3 demethylase activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
© 2024 All Rights Reserved.
