Gene detail

Detailed information of WZF009030 in Chaetoderma shenloong Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
WZF009030	ACYL-COA DEHYDROGENASE	chr10	17976198	18073466	+

Gene Structure

More details in Jbrowse Sequence

CDS

WZF009030.1

ATGATCAACGAGGAAGAGAAGACATGGGGCTCGCGGGAGTTCTGGGGTGTCAGCTCAAGGTTTGACCCCCAGTGGGTGCTGACAGATGAACAGAAGGTCATACAGAAGAACCTTATTGAGTTGTGTAGAACCACCTTGAGACCGAATGCTGTACGGTGTGACGAAACATACGAGTTTCCTCGAGAGAATCTGAATGCCCTTGCTTCACAAGGTCTTCTAGGATTGGTGGTGCCGAAAGAATTCGGAGGTCTTGGGCAAAACCAGATCTGTGCTGCTATGGTTGTCGAAACTATCTCTCGATACGGCTGCCCAAGCACGGCTACGATTTACGTAATGCATTTGGCATCTGTATGTTGCCTCGCTGCTCGGTACCACAGAAACAAGCACATACAAGACTTACTTAAAAGTCTGGACAAAGACCAGAAGGTTGGGACATTAGCTTTCAGTGATCCAGCGACAGGTGGCCACTTTTGGTATTTCCTGTCATCAAAATGTTGGAAATTGTCTGATGGTAGCTTCCAGCTTTTGAAGTTCGGATCATGGGCTACGAGTGCGGGGTTTGCTGACTTCTACGTCATACAGACAGTCAGCCCAGAGTTTCGCGGCAACTATCAGAACATGAGCGTATTTCTGGTGTATAAGGACGAGGTTCGTGCCAACACAGAAGACTGGTCAGCGTTAGGCATGCACGGGAACCAGTCAGGACCAATGGTAGCGGAAGGCGTCTTCACTAGAGATCGTCTTGTTGGAGAGATAGGAGAAGGAGAGCTGTCATTATTTGAGTTTATCGATCCGCTTGGCATGCTTTTATTCGCTGCTGACTTCAATGGTATATCCATGGGAGCTATAGACATCGCGCGGAAGCATACAATATCCCGCACCCATGCAGATACCGGCATGCGAGTCTGCGATTATCCAATTATACAGGACAAGATCGGTCAAGCAATGTGCGATACGAGTGCAGCGCGCTTGATGGTGATCGCCATAGCTCAGCAACTGGACAAGATGACCAATAACTGTGATTGGTCAAAATACGAGGATCCAACATATCGGCCCAGGACACCGATAGGCCATTGGTCATACCAAGCTAAGGTAATCAGCTGTAAAAACGTATACAAGATCGTTGACAAGATGTTGCAAGCATGTGGCGGATCAGGGTACAAGACAGAACTAGGCTTGGAGCGACTTCTTCGAGACGGTAAGGCAGGCTGGATCATGGGTCCGTCAAATGAGGTTGAAGTACAAGTGATTGCTGGCTATGTTTTGTATGGAAAAGACAATTTCGACTATTGGAATAACTTACCAAACCCAAGAGTTGTTCGACAAGAAGTGAAGAAAATGACTGGCAAACAGAAAACAGAACTAGCGAAGCACCTCCTGTGGGAAGTTGATGCCGAAGAGGAATCAGTTGGACAGACTGATGCGGATACATTTGACTTTGATAATCCCCTGGCTGTCAGAAAATCCAAGGTGGCTGAAATTACAAAACCAGCGCTACAAGCAGATGCCCCTACATGCTTCACGTTGAAGGAGAAACGCATCCTAACAAAGGACGAACGAATGGCAGTTTACACATTCGCTATGCCACCTGGAACATCACACACTGGCTGTCTTCCTGGACAGTATATCCAGATTATTATTCCTGAAGGTGGAAGAGAGTCTGTGAGATTCTTGTCACCCACGTCACCACCAGATACTGATGGAGAACTAGAAATCGTACTGAGGCGTGAGAACTTGGGCGTTCTGGCTACGTTCATGAAACAACTTGATATCGGTAGTACTGCACAGTTCCGAGGACCATGTGGTGGTTTTGAATACACCCCGAATACTTTTGACTCGTTAACATTCGTCTGTGGTGGAATTGGAATCACCCCCGCATATCAGATAATCAGGAGTATCAGTAAGAACCCGGATGACAAAACCAAAGTCCTACTGTTGTATCAAGCCAAAGATTCCAATGATATGATTTTCAAGAAAGAAATAGAGGACATGTGTTCTTCACGTGCCGATCAGCAAATCAGAGCTGAGTTCATCGTGAATGACCCGGATGAAACTTGGGACGGACCAGTTGGTGACGTGGATTCCGTGCTTTTGCATAAATACTTCAAAACCCTTCCACCTGAGACGATTCGGCATGTGTTTGTGCTGTGTGGTGGGGCGTATATGGCGGTACGCTGTCTCGATGTATTGCATCAACTTCACGCAAAAAGTGAGGATATCTTCGTCTATGGGCCATTCGCTGCAGAACAAATACGGGCCATGTTTGGGCGGAATGTAAAACTTTTCTCGCAGTAA

Transcript

WZF009030.1

CTTTCCACCTGAGCTGTTGTTGACATGTTAAATCTCAATTGCATTTATGAACTATCCTTCTTAGATACTCTGATATTACGAGCTAGCCAAGTGTGGCAAACTAGATAAAACAATACTCGAATGGAATATCCAGAACAAACCCGTACCGTTCAAACTACTGAGCAATGTCCGAAATCCTACGTGGTTATGACGTAGCTATAGCTTGACGTATTTGACACTTGGCATAAATGACCACAGCACTAATGCTAATCTAGAGGTACGTCGCGAACAGTTTTTGAACGAAACGTCTTAAAAGGTCGAGATATATTACATTCTTACTTCATTACTCACGTCCTCGCATAAAGCTGAACACATCGCTAATCGTCTTTAACAACTTTTGTCTGTAAGAATGATCAACGAGGAAGAGAAGACATGGGGCTCGCGGGAGTTCTGGGGTGTCAGCTCAAGGTTTGACCCCCAGTGGGTGCTGACAGATGAACAGAAGGTCATACAGAAGAACCTTATTGAGTTGTGTAGAACCACCTTGAGACCGAATGCTGTACGGTGTGACGAAACATACGAGTTTCCTCGAGAGAATCTGAATGCCCTTGCTTCACAAGGTCTTCTAGGATTGGTGGTGCCGAAAGAATTCGGAGGTCTTGGGCAAAACCAGATCTGTGCTGCTATGGTTGTCGAAACTATCTCTCGATACGGCTGCCCAAGCACGGCTACGATTTACGTAATGCATTTGGCATCTGTATGTTGCCTCGCTGCTCGGTACCACAGAAACAAGCACATACAAGACTTACTTAAAAGTCTGGACAAAGACCAGAAGGTTGGGACATTAGCTTTCAGTGATCCAGCGACAGGTGGCCACTTTTGGTATTTCCTGTCATCAAAATGTTGGAAATTGTCTGATGGTAGCTTCCAGCTTTTGAAGTTCGGATCATGGGCTACGAGTGCGGGGTTTGCTGACTTCTACGTCATACAGACAGTCAGCCCAGAGTTTCGCGGCAACTATCAGAACATGAGCGTATTTCTGGTGTATAAGGACGAGGTTCGTGCCAACACAGAAGACTGGTCAGCGTTAGGCATGCACGGGAACCAGTCAGGACCAATGGTAGCGGAAGGCGTCTTCACTAGAGATCGTCTTGTTGGAGAGATAGGAGAAGGAGAGCTGTCATTATTTGAGTTTATCGATCCGCTTGGCATGCTTTTATTCGCTGCTGACTTCAATGGTATATCCATGGGAGCTATAGACATCGCGCGGAAGCATACAATATCCCGCACCCATGCAGATACCGGCATGCGAGTCTGCGATTATCCAATTATACAGGACAAGATCGGTCAAGCAATGTGCGATACGAGTGCAGCGCGCTTGATGGTGATCGCCATAGCTCAGCAACTGGACAAGATGACCAATAACTGTGATTGGTCAAAATACGAGGATCCAACATATCGGCCCAGGACACCGATAGGCCATTGGTCATACCAAGCTAAGGTAATCAGCTGTAAAAACGTATACAAGATCGTTGACAAGATGTTGCAAGCATGTGGCGGATCAGGGTACAAGACAGAACTAGGCTTGGAGCGACTTCTTCGAGACGGTAAGGCAGGCTGGATCATGGGTCCGTCAAATGAGGTTGAAGTACAAGTGATTGCTGGCTATGTTTTGTATGGAAAAGACAATTTCGACTATTGGAATAACTTACCAAACCCAAGAGTTGTTCGACAAGAAGTGAAGAAAATGACTGGCAAACAGAAAACAGAACTAGCGAAGCACCTCCTGTGGGAAGTTGATGCCGAAGAGGAATCAGTTGGACAGACTGATGCGGATACATTTGACTTTGATAATCCCCTGGCTGTCAGAAAATCCAAGGTGGCTGAAATTACAAAACCAGCGCTACAAGCAGATGCCCCTACATGCTTCACGTTGAAGGAGAAACGCATCCTAACAAAGGACGAACGAATGGCAGTTTACACATTCGCTATGCCACCTGGAACATCACACACTGGCTGTCTTCCTGGACAGTATATCCAGATTATTATTCCTGAAGGTGGAAGAGAGTCTGTGAGATTCTTGTCACCCACGTCACCACCAGATACTGATGGAGAACTAGAAATCGTACTGAGGCGTGAGAACTTGGGCGTTCTGGCTACGTTCATGAAACAACTTGATATCGGTAGTACTGCACAGTTCCGAGGACCATGTGGTGGTTTTGAATACACCCCGAATACTTTTGACTCGTTAACATTCGTCTGTGGTGGAATTGGAATCACCCCCGCATATCAGATAATCAGGAGTATCAGTAAGAACCCGGATGACAAAACCAAAGTCCTACTGTTGTATCAAGCCAAAGATTCCAATGATATGATTTTCAAGAAAGAAATAGAGGACATGTGTTCTTCACGTGCCGATCAGCAAATCAGAGCTGAGTTCATCGTGAATGACCCGGATGAAACTTGGGACGGACCAGTTGGTGACGTGGATTCCGTGCTTTTGCATAAATACTTCAAAACCCTTCCACCTGAGACGATTCGGCATGTGTTTGTGCTGTGTGGTGGGGCGTATATGGCGGTACGCTGTCTCGATGTATTGCATCAACTTCACGCAAAAAGTGAGGATATCTTCGTCTATGGGCCATTCGCTGCAGAACAAATACGGGCCATGTTTGGGCGGAATGTAAAACTTTTCTCGCAGTAAAACGAGAAAACCCCCAGATAAACCGACCTTAATTTGAAATTCTCTAAAGGAACACATTTAGATTACAATTCTAAGCTTTACTATATATATGTACTGGGTTACCTCTTATACTGCTCTATAATAATAATCTAAGTTATTGCTGTCTGTGTCGTGTTCAAAGTACCAAACCAAACAGACCA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00175	NAD_binding_1	Oxidoreductase NAD-binding domain	Domain	Interproscan
PF00441	Acyl-CoA_dh_1	Acyl-CoA dehydrogenase, C-terminal domain	Domain	Interproscan
PF00970	FAD_binding_6	Oxidoreductase FAD-binding domain	Domain	Interproscan
PF02771	Acyl-CoA_dh_N	Acyl-CoA dehydrogenase, N-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001433	Domain	Oxidoreductase FAD/NAD(P)-binding	Interproscan
IPR006089	Conserved_site	Acyl-CoA dehydrogenase, conserved site	Interproscan
IPR008333	Domain	Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain	Interproscan
IPR009075	Domain	Acyl-CoA dehydrogenase/oxidase, C-terminal	Interproscan
IPR009100	Homologous_superfamily	Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily	Interproscan
IPR013786	Domain	Acyl-CoA dehydrogenase/oxidase, N-terminal	Interproscan
IPR017927	Domain	FAD-binding domain, ferredoxin reductase-type	Interproscan
IPR017938	Homologous_superfamily	Riboflavin synthase-like beta-barrel	Interproscan
IPR036250	Homologous_superfamily	Acyl-CoA dehydrogenase-like, C-terminal	Interproscan
IPR037069	Homologous_superfamily	Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily	Interproscan
IPR039261	Homologous_superfamily	Ferredoxin-NADP reductase (FNR), nucleotide-binding domain	Interproscan
IPR046373	Homologous_superfamily	Acyl-CoA oxidase/dehydrogenase, middle domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43884	ACYL-COA DEHYDROGENASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003995	Molecular Function	acyl-CoA dehydrogenase activity	Interproscan
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan
GO:0016627	Molecular Function	oxidoreductase activity, acting on the CH-CH group of donors	Interproscan
GO:0050660	Molecular Function	flavin adenine dinucleotide binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-