Gene detail

Detailed information of WZF002520 in Chaetoderma shenloong Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
WZF002520	INNER MEMBRANE TRANSPORTER YGJI-RELATED	chr1	121633591	121695915	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

WZF002520.2

GCACGGCGTATAGACAGAGCTACAGGTAGATTTTCACACAGCTAAAAGGAAATGGATTTGTTGGCGCCAGTTAGAAATTTTGTTAAGGCCTTACTGAGGAGAAAATACATCGATAATGAAACAGTCACAAGAACAGAGCTATCCAGATGCCTTTCTACGTATGATCTCACATTTCTCGGGATTGGTAGTACTCTAGGAGCTGGTATCTATGTGTTGGCGGGTCAGGTGGCCCTGGAGAAAGCTGGACCAGCAGTCGTTCTTTCATTTCTAATCGCTGCGGTAGCGGCAGTGCTAGCTGGTCTCTGTTATGCAGAATTCGGGGCACGTGTGCCGAAAACTGGGTCGGCGTATGTATACAGTTACGTCACTGTCGGAGAATTTGCTGCTTTTGTCATTGGCTGGAATCTCATCTTGGAATACGTCATAGGTAGTGCCAGTGTAGCGCGTGCATGGAGTGATTATTTCAACTCTATGATCGACGACCGTATAACGATATTCTTCAGGGAACACATGCCCATGAATATATCAGGACTGTCACCATACCCGGACTTCTTTGCTTTTGCCATCACATTCCTCTTGGCAGTGATATTGGCTATGGGTGTCAAGGAGTCGGCGAGATTTAACACGGTCTTCACGTGCGTGAACCTCCTCGTGGTGGTTTACGTCATTATATGCGGACTATTCAAAGCTGATGGGAGTAACTGGAAGATCCCTCAGAAAGACGTACCACCAGGTCGTGGCACTGGTGGTTTTATGCCTTATGGCATATCCGGTGTTCTAACGGGAGCCGCGACATGCTTCTATGGATTTGTGGGATTTGACTGCATTGCCACAACAGGCGAGGAGGTAAAGAACCCACGAAAAGCCATCCCGCTCAGCATCTCAATCTCTCTCCTGGTGATCTTCTTGGCGTATTTCACCGTGTCCACTGTGCTAACTCTAATGGTCCCGTACTTCCTGCTTGACCGGCAAGCACCTCTCCCTCTCGCCTTTGAGAGGGCTGGATGGGGCGTGGCTAAATATATCATCTCTGTAGGAGGAATTGCCGCCCTTTCAACAAGCCTTATGGGCGCCATGTTTCCGCTACCCAGAGTGCTTTACGCTATGGCAACCGATGGTCTCATCTTCCGGTTTATGTCACACATTTACAAGCGCTTTAAGACACCTTTCCTAGCGACCATCATATCCGGATTATTTGCTGGTGGAATGGCCATGTTGTTTGATGTGACTGAGCTCGTAAATATGATGTCCATAGGAACTCTGCTAGCATATACACTCGTGGCAATCTGTGTCCTTATCCTAAGGTACATGACGGACGCGTCACAGCCCGGTGCTGAGTCAGTAGATAGGGATCTACTTAACGAACATTCACGTGGCATAGACTCAGCGGGCTGGTCAACGGGGCTAATTGTGAAAACTATGTTCTGTAAAACAACTATAGAGCCCACACCACTGTCACAACGCATCGCTATAGTAACAACGTGTATACTTAGTTTATTATTAGTGGTGTTTGCTGTAATGCTAATATTCGGGGAAGAACATCTAAGCAATCACGATTGGTGGCCAATTGCACTTAGCTGCTTGTTTGGCGCCCTTATTATCGTGGGAACATTTGTAATATGGCGTCAACCACAGAATAAGACAGAACTCACATTTAAGGTGCCGTGTGTGCCGTTTAGTGCAATTATCAGTATATTTGTAAACGTCTATCTAATGCTCAAACTTCCAGTGCCCACGTGGATACGGTTCGCTGTTTGGATGGCTATAGGGTTCGCTATCTATTTTGGTTATGGAATATGGAAGAGCTCAGAACGCGAGCGCCCTCTGCTGGTTGCCAGTGTAGGACGATCTACCTATGGATCGACAGACGCTAACCAGACGCCCTCCTCCCCTCTAGAAAAAACGATACCAGTCGACGGGGATGAGATACATATCTTATACGGTTAACCCTTTTAACCTTTGCAGATCAAAAACAACAAATTCGTGATGTTGTAGTGAATATGTCTTTGAATATTTTGAAACTAATTTGACTTGGACTTGTTGCTGCGCATGGCGGCAACAGGTTCCAGTCAAATTAGTTTCAAAATATTCAACCGCTTCTGCATATGCCTCGCTATCTAAAAATTGAGAAACTATTATTGCAAGGGTTAACGGGAAGACCCTTACTAAACCGCCATCATAAGGAGCGGCAACAAGTGCTCTTCTAAACTATCCAGGTTTCTAACACTTTGGATATCGATGATGAATATTTTGAAACCAACTTGACTGGGATCTGGTGCTGACATGTTTTCAAGAATTTCCTTGATTTTG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13520	AA_permease_2	Amino acid permease	Family	Interproscan
PF13906	AA_permease_C	C-terminus of AA_permease	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002293	Family	Amino acid/polyamine transporter I	Interproscan
IPR004755	Family	Cationic amino acid transport permease	Interproscan
IPR029485	Domain	Cationic amino acid transporter, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43243	INNER MEMBRANE TRANSPORTER YGJI-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000064	Molecular Function	L-ornithine transmembrane transporter activity	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0006865	Biological Process	amino acid transport	Interproscan
GO:0015171	Molecular Function	amino acid transmembrane transporter activity	Interproscan
GO:0015181	Molecular Function	L-arginine transmembrane transporter activity	Interproscan
GO:0015189	Molecular Function	L-lysine transmembrane transporter activity	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0022857	Molecular Function	transmembrane transporter activity	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan
GO:0097638	Biological Process	L-arginine import across plasma membrane	Interproscan
GO:1903352	Biological Process	L-ornithine transmembrane transport	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-