Detailed information of WZF002390 in Chaetoderma shenloong Gene info
Gene IDAnnotationChromosomeStartEndStrand
WZF002390RIBOSOMAL RNA METHYLTRANSFERASEchr126101308961135045+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
--

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01728FtsJFtsJ-like methyltransferaseFamilyInterproscan
PF07780Spb1_CSpb1 C-terminal domainDomainInterproscan
PF11861DUF3381Ribosomal RNA methyltransferase Spb1, DUF3381DomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR002877DomainRibosomal RNA methyltransferase, FtsJ domainInterproscan
IPR012920DomainRibosomal RNA methyltransferase, SPB1-like, C-terminalInterproscan
IPR015507FamilyRibosomal RNA large subunit methyltransferase EInterproscan
IPR024576DomainRibosomal RNA methyltransferase Spb1, domain of unknown function DUF3381Interproscan
IPR028589FamilyAdoMet-dependent rRNA methyltransferase SPB1-likeInterproscan
IPR029063Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR050082FamilyRibosomal RNA large subunit methyltransferase RlmEInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR10920RIBOSOMAL RNA METHYLTRANSFERASEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000463Biological Processmaturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0000466Biological Processmaturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0001510Biological ProcessRNA methylationInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0006364Biological ProcessrRNA processingInterproscan
GO:0008168Molecular Functionmethyltransferase activityInterproscan
GO:0008173Molecular FunctionRNA methyltransferase activityInterproscan
GO:0008649Molecular FunctionrRNA methyltransferase activityInterproscan
GO:0008650Molecular FunctionrRNA (uridine-2'-O-)-methyltransferase activityInterproscan
GO:0016435Molecular FunctionrRNA (guanine) methyltransferase activityInterproscan
GO:0030687Cellular Componentpreribosome, large subunit precursorInterproscan
GO:0031167Biological ProcessrRNA methylationInterproscan
GO:0032259Biological ProcessmethylationInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
------

TOP