| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| Sda_chr09g03207.1 | PRE-MRNA SPLICING FACTOR PRP31 | Sda_Chr9 | 235526656 | 235551704 | - |
| CDS | |||||
| Sda_chr09g03207.1 | |||||
| Transcript |
| Sda_chr09g03207.1 |
| Protein |
| Sda_chr09g03207.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01798 | Nop | snoRNA binding domain, fibrillarin | Family | Interproscan |
| PF09785 | Prp31_C | Prp31 C terminal domain | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR002687 | Domain | Nop domain | Interproscan |
| IPR012976 | Domain | NOSIC | Interproscan |
| IPR019175 | Domain | Prp31 C-terminal | Interproscan |
| IPR027105 | Family | U4/U6 small nuclear ribonucleoprotein Prp31 | Interproscan |
| IPR036070 | Homologous_superfamily | Nop domain superfamily | Interproscan |
| IPR042239 | Homologous_superfamily | Nop, C-terminal domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13904 | PRE-MRNA SPLICING FACTOR PRP31 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000244 | Biological Process | spliceosomal tri-snRNP complex assembly | Interproscan |
| GO:0000398 | Biological Process | mRNA splicing, via spliceosome | Interproscan |
| GO:0005687 | Cellular Component | U4 snRNP | Interproscan |
| GO:0046540 | Cellular Component | U4/U6 x U5 tri-snRNP complex | Interproscan |
| GO:0071011 | Cellular Component | precatalytic spliceosome | Interproscan |
| GO:0097526 | Cellular Component | spliceosomal tri-snRNP complex | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
© 2024 All Rights Reserved.
