| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| Sda_chr09g03042.1 | INTEGRASE CORE DOMAIN CONTAINING PROTEIN | Sda_Chr9 | 224729910 | 224731488 | - |
| CDS | |||||
| Sda_chr09g03042.1 | |||||
| Transcript |
| Sda_chr09g03042.1 |
| Protein |
| Sda_chr09g03042.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00352 | TBP | Transcription factor TFIID (or TATA-binding protein, TBP) | Domain | Interproscan |
| PF00665 | rve | Integrase core domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000814 | Family | TATA-box binding protein | Interproscan |
| IPR000953 | Domain | Chromo/chromo shadow domain | Interproscan |
| IPR001584 | Domain | Integrase, catalytic core | Interproscan |
| IPR012295 | Homologous_superfamily | TBP domain superfamily | Interproscan |
| IPR012337 | Homologous_superfamily | Ribonuclease H-like superfamily | Interproscan |
| IPR016197 | Homologous_superfamily | Chromo-like domain superfamily | Interproscan |
| IPR036397 | Homologous_superfamily | Ribonuclease H superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR46585 | INTEGRASE CORE DOMAIN CONTAINING PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0003677 | Molecular Function | DNA binding | Interproscan |
| GO:0006352 | Biological Process | DNA-templated transcription initiation | Interproscan |
| GO:0015074 | Biological Process | DNA integration | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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