Gene ID | Annotation | Chromosome | Start | End | Strand |
---|---|---|---|---|---|
Sda_chr09g02489.1 | CADHERIN-23 | Sda_Chr9 | 186741851 | 186844455 | - |
CDS | |||||
Sda_chr09g02489.1 | |||||
Transcript |
Sda_chr09g02489.1 |
Protein |
Sda_chr09g02489.1 |
Gene family | Subfamily |
---|---|
- | - |
Pfam accession | Pfam name | Description | Type | Source |
---|---|---|---|---|
PF00008 | EGF | EGF-like domain | Domain | Interproscan |
PF00028 | Cadherin | Cadherin domain | Domain | Interproscan |
PF02210 | Laminin_G_2 | Laminin G domain | Domain | Interproscan |
InterPro term | Type | Description | Source |
---|---|---|---|
IPR000742 | Domain | EGF-like domain | Interproscan |
IPR001791 | Domain | Laminin G domain | Interproscan |
IPR001881 | Domain | EGF-like calcium-binding domain | Interproscan |
IPR002126 | Domain | Cadherin-like | Interproscan |
IPR013320 | Homologous_superfamily | Concanavalin A-like lectin/glucanase domain superfamily | Interproscan |
IPR015919 | Homologous_superfamily | Cadherin-like superfamily | Interproscan |
IPR020894 | Conserved_site | Cadherin conserved site | Interproscan |
IPR039808 | Family | Cadherin | Interproscan |
PANTHER term | Description | Source |
---|---|---|
PTHR24027 | CADHERIN-23 | Interproscan |
GO terms | Category | Description | Source |
---|---|---|---|
GO:0005509 | Molecular Function | calcium ion binding | Interproscan |
GO:0005886 | Cellular Component | plasma membrane | Interproscan |
GO:0007155 | Biological Process | cell adhesion | Interproscan |
GO:0007156 | Biological Process | homophilic cell adhesion via plasma membrane adhesion molecules | Interproscan |
GO:0016020 | Cellular Component | membrane | Interproscan |
GO:0016342 | Cellular Component | catenin complex | Interproscan |
GO:0045296 | Molecular Function | cadherin binding | Interproscan |
GO:0098609 | Biological Process | cell-cell adhesion | Interproscan |
GO:0098742 | Biological Process | cell-cell adhesion via plasma-membrane adhesion molecules | Interproscan |
KO | Enzyme | Enzyme ID | pathway | mapID | Source |
---|---|---|---|---|---|
- | - | - | - | - | - |